Gm21983 Gene Detail

Summary

• Symbol
  Gm21983
• Name
  predicted gene 21983

• Feature Type
  protein coding gene
• IDs
  MGI:5439452
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:26867855-26880511 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  346 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5439452	protein coding gene	Chr7:26867855-26880511 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0031899	protein coding gene	Chr7:25782293-25798662 (-)
A/J	MGP_AJ_G0031878	protein coding gene	Chr7:25174950-25193875 (-)
AKR/J	MGP_AKRJ_G0031808	protein coding gene	Chr7:25847510-25860075 (-)
BALB/cJ	MGP_BALBcJ_G0031883	protein coding gene	Chr7:25404821-25418170 (-)
C3H/HeJ	MGP_C3HHeJ_G0031605	protein coding gene	Chr7:26227338-26240336 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0032348	protein coding gene	Chr7:26640033-26653201 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0029400	protein coding gene	Chr7:26419361-26431727 (-)
CAST/EiJ	MGP_CASTEiJ_G0030940	protein coding gene	Chr7:19523902-19540609 (-)
CBA/J	MGP_CBAJ_G0031570	protein coding gene	Chr7:27804793-27818856 (-)
DBA/2J	MGP_DBA2J_G0031722	protein coding gene	Chr7:24982933-24995498 (-)
FVB/NJ	MGP_FVBNJ_G0031678	protein coding gene	Chr7:25065297-25078987 (-)
LP/J	MGP_LPJ_G0031802	protein coding gene	Chr7:26124919-26140281 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0031713	protein coding gene	Chr7:27418919-27431580 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0032379	protein coding gene	Chr7:25379354-25391866 (-)
PWK/PhJ	MGP_PWKPhJ_G0030664	protein coding gene	Chr7:20012613-20025696 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0030498	protein coding gene	Chr7:16368297-16380746 (-)
WSB/EiJ	MGP_WSBEiJ_G0031048	protein coding gene	Chr7:25666001-25678617 (-)

Homology

• Gene Tree
  Gm21983
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000095538 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000095538	Ensembl Gene Model | MGI Sequence Detail	12657	C57BL/6J
transcript	ENSMUST00000154724	Ensembl | MGI Sequence Detail	1690	Not Applicable
polypeptide	ENSMUSP00000122859	Ensembl | MGI Sequence Detail	131	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR043369 Melanoma-derived growth regulatory protein
  IPR001452 SH3 domain
  IPR036028 SH3-like domain superfamily

References

• Summaries
  All 3
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm21983:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr71363	Chr7:26880472-26880562 (-)	-6 bp