Gm22013 Gene Detail

Summary

• Symbol
  Gm22013
• Name
  predicted gene, 22013

• Feature Type
  snRNA gene
• IDs
  MGI:5451790
  NCBI Gene: 115488261
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:24670645-24670747 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5451790	snRNA gene	Chr13:24670645-24670747 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037420	snRNA gene	Chr13:21961964-21962066 (-)
A/J	MGP_AJ_G0037414	snRNA gene	Chr13:21553708-21553810 (-)
AKR/J	MGP_AKRJ_G0037354	snRNA gene	Chr13:21801929-21802031 (-)
BALB/cJ	MGP_BALBcJ_G0037400	snRNA gene	Chr13:21548457-21548559 (-)
C3H/HeJ	MGP_C3HHeJ_G0037078	snRNA gene	Chr13:21878557-21878659 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037917	snRNA gene	Chr13:22751561-22751663 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034898	snRNA gene	Chr13:20303647-20303749 (-)
CAST/EiJ	MGP_CASTEiJ_G0036253	snRNA gene	Chr13:21586499-21586601 (-)
CBA/J	MGP_CBAJ_G0037052	snRNA gene	Chr13:23612303-23612405 (-)
DBA/2J	MGP_DBA2J_G0037230	snRNA gene	Chr13:21069380-21069482 (-)
FVB/NJ	MGP_FVBNJ_G0037177	snRNA gene	Chr13:20712847-20712949 (-)
LP/J	MGP_LPJ_G0037280	snRNA gene	Chr13:22268921-22269023 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037193	snRNA gene	Chr13:23896172-23896274 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038033	snRNA gene	Chr13:21655575-21655677 (-)
PWK/PhJ	MGP_PWKPhJ_G0035948	snRNA gene	Chr13:21103249-21103351 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035740	snRNA gene	Chr13:20470174-20470276 (-)
WSB/EiJ	MGP_WSBEiJ_G0036463	snRNA gene	Chr13:21808210-21808312 (-)

Homology

• Gene Tree
  Gm22013
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm22013
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089413 (Evidence)
• NCBI Gene
  115488261

Representative Sequences			Length	Strain/Species
genomic	115488261	NCBI Gene Model | MGI Sequence Detail	103	C57BL/6J
transcript	XR_004938333	RefSeq | MGI Sequence Detail	103	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:71411 Arkell RM, et al., Genetic, physical, and phenotypic characterization of the Del(13)Svea36H mouse. Mamm Genome. 2001 Sep;12(9):687-94
• Latest
  J:141688 Goldsworthy M, et al., Role of the transcription factor sox4 in insulin secretion and impaired glucose tolerance. Diabetes. 2008 Aug;57(8):2234-44