Gm22126 Gene Detail

Summary

• Symbol
  Gm22126
• Name
  predicted gene, 22126

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5451903
  NCBI Gene: 115488215
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:35846118-35846259 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5451903	snRNA gene	Chr13:35846118-35846259 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037425	snRNA gene	Chr13:33843077-33843218 (+)
A/J	MGP_AJ_G0037419	snRNA gene	Chr13:32832047-32832188 (+)
AKR/J	MGP_AKRJ_G0037359	snRNA gene	Chr13:33625248-33625389 (+)
BALB/cJ	MGP_BALBcJ_G0037405	snRNA gene	Chr13:32895333-32895474 (+)
C3H/HeJ	MGP_C3HHeJ_G0037083	snRNA gene	Chr13:33508124-33508265 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037922	snRNA gene	Chr13:34982872-34983013 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034903	snRNA gene	Chr13:31059733-31059863 (+)
CAST/EiJ	MGP_CASTEiJ_G0036257	snRNA gene	Chr13:33208980-33209122 (+)
CBA/J	MGP_CBAJ_G0037056	snRNA gene	Chr13:36478320-36478461 (+)
DBA/2J	MGP_DBA2J_G0037235	snRNA gene	Chr13:32351104-32351245 (+)
FVB/NJ	MGP_FVBNJ_G0037181	snRNA gene	Chr13:31897606-31897747 (+)
LP/J	MGP_LPJ_G0037285	snRNA gene	Chr13:34077139-34077280 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037198	snRNA gene	Chr13:36645422-36645563 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038038	snRNA gene	Chr13:33236579-33236720 (+)
PWK/PhJ	MGP_PWKPhJ_G0035952	snRNA gene	Chr13:32460623-32460764 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035744	snRNA gene	Chr13:31942410-31942556 (+)
WSB/EiJ	MGP_WSBEiJ_G0036468	snRNA gene	Chr13:33600353-33600494 (+)

Homology

• Gene Tree
  Gm22126
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000065178 (Evidence)
• NCBI Gene
  115488215

Representative Sequences			Length	Strain/Species
genomic	115488215	NCBI Gene Model | MGI Sequence Detail	142	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm22126:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr119240	Chr13:35846116-35846121 (+)	1 bp