Gm22140 Gene Detail

Summary

• Symbol
  Gm22140
• Name
  predicted gene, 22140

• Feature Type
  snRNA gene
• IDs
  MGI:5451917
  NCBI Gene: 115487032
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:32676173-32676276 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5451917	snRNA gene	Chr8:32676157-32676276 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038175	snRNA gene	Chr8:30625795-30625914 (+)
A/J	MGP_AJ_G0038168	snRNA gene	Chr8:29443382-29443501 (+)
AKR/J	MGP_AKRJ_G0038107	snRNA gene	Chr8:30369229-30369348 (+)
BALB/cJ	MGP_BALBcJ_G0038153	snRNA gene	Chr8:29573987-29574106 (+)
C3H/HeJ	MGP_C3HHeJ_G0037823	snRNA gene	Chr8:30670991-30671110 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038684	snRNA gene	Chr8:31773173-31773287 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035510	snRNA gene	Chr8:26292250-26292369 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0037796	snRNA gene	Chr8:33043759-33043878 (+)
DBA/2J	MGP_DBA2J_G0037981	snRNA gene	Chr8:29422594-29422713 (+)
FVB/NJ	MGP_FVBNJ_G0037928	snRNA gene	Chr8:29137847-29137966 (+)
LP/J	MGP_LPJ_G0038020	snRNA gene	Chr8:30578665-30578784 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037933	snRNA gene	Chr8:32586794-32586913 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038795	snRNA gene	Chr8:30422977-30423096 (+)
PWK/PhJ	MGP_PWKPhJ_G0036661	snRNA gene	Chr8:28931272-28931391 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036428	snRNA gene	Chr8:29719062-29719181 (+)
WSB/EiJ	MGP_WSBEiJ_G0037195	snRNA gene	Chr8:30551290-30551409 (+)

Homology

• Gene Tree
  Gm22140
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000089370 (Evidence)
• NCBI Gene
  115487032

Representative Sequences			Length	Strain/Species
genomic	115487032	NCBI Gene Model | MGI Sequence Detail	104	C57BL/6J
transcript	XR_004935210	RefSeq | MGI Sequence Detail	104	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;