Gm22331 Gene Detail

Summary

• Symbol
  Gm22331
• Name
  predicted gene, 22331

• Feature Type
  snoRNA gene
• IDs
  MGI:5452108
  NCBI Gene: 115485769
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:112395641-112395776 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452108	snoRNA gene	Chr1:112395641-112395776 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038431	snoRNA gene	Chr1:114893370-114893505 (+)
A/J	MGP_AJ_G0038421	snoRNA gene	Chr1:110751362-110751497 (+)
AKR/J	MGP_AKRJ_G0038359	snoRNA gene	Chr1:113899635-113899769 (+)
BALB/cJ	MGP_BALBcJ_G0038408	snoRNA gene	Chr1:110959945-110960080 (+)
C3H/HeJ	MGP_C3HHeJ_G0038071	snoRNA gene	Chr1:114351484-114351619 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038946	snoRNA gene	Chr1:119262467-119262602 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0037217	snoRNA gene	Chr1:113328009-113328142 (+)
CBA/J	MGP_CBAJ_G0038043	snoRNA gene	Chr1:123367791-123367926 (+)
DBA/2J	MGP_DBA2J_G0038234	snoRNA gene	Chr1:109872945-109873079 (+)
FVB/NJ	MGP_FVBNJ_G0038184	snoRNA gene	Chr1:108713164-108713298 (+)
LP/J	MGP_LPJ_G0038273	snoRNA gene	Chr1:116235096-116235231 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038183	snoRNA gene	Chr1:129071312-129071446 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039055	snoRNA gene	Chr1:113910508-113910641 (+)
PWK/PhJ	MGP_PWKPhJ_G0036902	snoRNA gene	Chr1:108916802-108916935 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036660	snoRNA gene	Chr1:112492877-112493007 (+)
WSB/EiJ	MGP_WSBEiJ_G0037447	snoRNA gene	Chr1:113808606-113808741 (+)

Homology

• Gene Tree
  Gm22331
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000088691 (Evidence)
• NCBI Gene
  115485769

Representative Sequences			Length	Strain/Species
genomic	115485769	NCBI Gene Model | MGI Sequence Detail	136	C57BL/6J
transcript	XR_004936756	RefSeq | MGI Sequence Detail	136	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;