Gm22353 Gene Detail

Summary

• Symbol
  Gm22353
• Name
  predicted gene, 22353

• Feature Type
  snoRNA gene
• IDs
  MGI:5452130
  NCBI Gene: 115488556
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:38058529-38058664 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  93 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452130	snoRNA gene	Chr15:38058529-38058664 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0039308	snoRNA gene	Chr6:50894053-50894188 (-)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0038782	snoRNA gene	Chr15:35183686-35183821 (+)
C3H/HeJ	MGP_C3HHeJ_G0038444	snoRNA gene	Chr15:36119012-36119145 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039328	snoRNA gene	Chr15:37963818-37963953 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036069	snoRNA gene	Chr15:32920637-32920772 (+)
CAST/EiJ	MGP_CASTEiJ_G0037586	snoRNA gene	Chr15:36520312-36520447 (+)
CBA/J	MGP_CBAJ_G0038417	snoRNA gene	Chr15:39169033-39169166 (+)
DBA/2J	MGP_DBA2J_G0038605	snoRNA gene	Chr15:34981476-34981611 (+)
FVB/NJ	MGP_FVBNJ_G0038559	snoRNA gene	Chr15:34383586-34383721 (+)
LP/J	MGP_LPJ_G0038645	snoRNA gene	Chr15:36409861-36409996 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038557	snoRNA gene	Chr15:42203043-42203178 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039431	snoRNA gene	Chr15:36315537-36315672 (+)
PWK/PhJ	MGP_PWKPhJ_G0037271	snoRNA gene	Chr15:35017030-35017286 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037026	snoRNA gene	Chr15:35997006-35997141 (+)
WSB/EiJ	MGP_WSBEiJ_G0037815	snoRNA gene	Chr15:36262062-36262197 (+)

Homology

• Gene Tree
  Gm22353
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000065852 (Evidence)
• NCBI Gene
  115488556

Representative Sequences			Length	Strain/Species
genomic	115488556	NCBI Gene Model | MGI Sequence Detail	136	C57BL/6J
transcript	XR_004939073	RefSeq | MGI Sequence Detail	136	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;