Gm22357 Gene Detail

Summary

• Symbol
  Gm22357
• Name
  predicted gene, 22357

• Feature Type
  snoRNA gene
• IDs
  MGI:5452134
  NCBI Gene: 115487638
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:160863627-160863709 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452134	snoRNA gene	Chr1:160863627-160863709 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038454	snoRNA gene	Chr1:166287155-166287237 (+)
A/J	MGP_AJ_G0038444	snoRNA gene	Chr1:159519502-159519584 (+)
AKR/J	MGP_AKRJ_G0038382	snoRNA gene	Chr1:164387831-164387913 (+)
BALB/cJ	MGP_BALBcJ_G0038431	snoRNA gene	Chr1:160061163-160061245 (+)
C3H/HeJ	MGP_C3HHeJ_G0038094	snoRNA gene	Chr1:164589017-164589099 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038969	snoRNA gene	Chr1:171933644-171933726 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035750	snoRNA gene	Chr1:151637430-151637512 (+)
CAST/EiJ	MGP_CASTEiJ_G0037239	snoRNA gene	Chr1:164198061-164198143 (+)
CBA/J	MGP_CBAJ_G0038066	snoRNA gene	Chr1:178015503-178015585 (+)
DBA/2J	MGP_DBA2J_G0038257	snoRNA gene	Chr1:158498883-158498965 (+)
FVB/NJ	MGP_FVBNJ_G0038207	snoRNA gene	Chr1:156908027-156908109 (+)
LP/J	MGP_LPJ_G0038296	snoRNA gene	Chr1:167376970-167377052 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038206	snoRNA gene	Chr1:185588992-185589074 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039078	snoRNA gene	Chr1:164206535-164206617 (+)
PWK/PhJ	MGP_PWKPhJ_G0036924	snoRNA gene	Chr1:157654912-157654994 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036680	snoRNA gene	Chr1:163101940-163102022 (+)
WSB/EiJ	MGP_WSBEiJ_G0037470	snoRNA gene	Chr1:164396767-164396849 (+)

Homology

• Gene Tree
  Gm22357
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000064816 (Evidence)
• NCBI Gene
  115487638

Representative Sequences			Length	Strain/Species
genomic	115487638	NCBI Gene Model | MGI Sequence Detail	83	C57BL/6J
transcript	XR_004936751	RefSeq | MGI Sequence Detail	83	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm22357:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr9677	Chr1:160863623-160863636 (+)	3 bp