Gm22394 Gene Detail

Summary

• Symbol
  Gm22394
• Name
  predicted gene, 22394

• Feature Type
  snoRNA gene
• IDs
  MGI:5452171
  NCBI Gene: 115487516
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:77748470-77748545 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452171	snoRNA gene	Chr10:77748470-77748545 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038510	snoRNA gene	Chr10:78314083-78314158 (-)
A/J	MGP_AJ_G0038500	snoRNA gene	Chr10:75611658-75611733 (-)
AKR/J	MGP_AKRJ_G0038438	snoRNA gene	Chr10:77626916-77626991 (-)
BALB/cJ	MGP_BALBcJ_G0038487	snoRNA gene	Chr10:75779830-75779905 (-)
C3H/HeJ	MGP_C3HHeJ_G0038150	snoRNA gene	Chr10:77715038-77715113 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039025	snoRNA gene	Chr10:81098508-81098583 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035804	snoRNA gene	Chr10:71957356-71957431 (-)
CAST/EiJ	MGP_CASTEiJ_G0037294	snoRNA gene	Chr10:78038588-78038663 (-)
CBA/J	MGP_CBAJ_G0038122	snoRNA gene	Chr10:84168570-84168645 (-)
DBA/2J	MGP_DBA2J_G0038312	snoRNA gene	Chr10:74846951-74847026 (-)
FVB/NJ	MGP_FVBNJ_G0038263	snoRNA gene	Chr10:74022233-74022308 (-)
LP/J	MGP_LPJ_G0038352	snoRNA gene	Chr10:78760256-78760331 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038262	snoRNA gene	Chr10:86174744-86174819 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039134	snoRNA gene	Chr10:77662559-77662634 (-)
PWK/PhJ	MGP_PWKPhJ_G0036980	snoRNA gene	Chr10:74731652-74731727 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036736	snoRNA gene	Chr10:76881042-76881117 (-)
WSB/EiJ	MGP_WSBEiJ_G0037526	snoRNA gene	Chr10:77644718-77644793 (-)

Homology

• Gene Tree
  Gm22394
  

Human Diseases

• References
  2 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  23 phenotype references
  

• All Mutations and Alleles
  3
• Targeted
  3
• Genomic Mutations
  3 involving Gm22394
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000093784 (Evidence)
• NCBI Gene
  115487516

Representative Sequences			Length	Strain/Species
genomic	115487516	NCBI Gene Model | MGI Sequence Detail	76	C57BL/6J
transcript	XR_004936574	RefSeq | MGI Sequence Detail	76	C57BL/6J

References

• Summaries
  All 26

  Diseases 2

  Phenotypes 23
• Earliest
  J:167505 Duchon A, et al., Inducing segmental aneuploid mosaicism in the mouse through targeted asymmetric sister chromatid event of recombination. Genetics. 2008 Sep;180(1):51-9
• Latest
  J:351211 Wu Y, et al., Cathepsin B abundance, activity and microglial localisation in Alzheimer's disease-Down syndrome and early onset Alzheimer's disease; the role of elevated cystatin B. Acta Neuropathol Commun. 2023 Aug 14;11(1):132