Gm22430 Gene Detail

Summary

• Symbol
  Gm22430
• Name
  predicted gene, 22430

• Feature Type
  snoRNA gene
  BioType Conflict
  
• IDs
  MGI:5452207
  NCBI Gene: 115486112
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:103660471-103660577 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452207	snoRNA gene	ChrX:103660471-103660577 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039599	snoRNA gene	ChrX:101347937-101348043 (+)
A/J	MGP_AJ_G0039597	snoRNA gene	ChrX:101200948-101201054 (+)
AKR/J	MGP_AKRJ_G0039524	snoRNA gene	ChrX:104322156-104322262 (+)
BALB/cJ	MGP_BALBcJ_G0039577	snoRNA gene	ChrX:100001546-100001652 (+)
C3H/HeJ	MGP_C3HHeJ_G0039235	snoRNA gene	ChrX:101803836-101803942 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040129	snoRNA gene	ChrX:104290569-104290675 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036768	snoRNA gene	ChrX:98788988-98789094 (+)
CAST/EiJ	MGP_CASTEiJ_G0038362	snoRNA gene	ChrX:86052719-86052825 (+)
CBA/J	MGP_CBAJ_G0039206	snoRNA gene	ChrX:107550195-107550301 (+)
DBA/2J	MGP_DBA2J_G0039400	snoRNA gene	ChrX:100468758-100468864 (+)
FVB/NJ	MGP_FVBNJ_G0039355	snoRNA gene	ChrX:99770704-99770810 (+)
LP/J	MGP_LPJ_G0039440	snoRNA gene	ChrX:102327711-102327817 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039356	snoRNA gene	ChrX:112234954-112235060 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040225	snoRNA gene	ChrX:101006932-101007038 (+)
PWK/PhJ	MGP_PWKPhJ_G0038041	snoRNA gene	ChrX:83600715-83600821 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037791	snoRNA gene	ChrX:86770120-86770226 (+)
WSB/EiJ	MGP_WSBEiJ_G0038591	snoRNA gene	ChrX:99730347-99730453 (+)

Homology

• Gene Tree
  Gm22430
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000089171 (Evidence)
• NCBI Gene
  115486112

Representative Sequences			Length	Strain/Species
genomic	115486112	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;