Gm22438 Gene Detail

Summary

• Symbol
  Gm22438
• Name
  predicted gene, 22438

• Feature Type
  snoRNA gene
• IDs
  MGI:5452215
  NCBI Gene: 115485786
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:107820704-107820835 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452215	snoRNA gene	Chr1:107820704-107820835 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038429	snoRNA gene	Chr1:110136480-110136611 (+)
A/J	MGP_AJ_G0038419	snoRNA gene	Chr1:106299596-106299727 (+)
AKR/J	MGP_AKRJ_G0038357	snoRNA gene	Chr1:109244343-109244474 (+)
BALB/cJ	MGP_BALBcJ_G0038406	snoRNA gene	Chr1:106402681-106402812 (+)
C3H/HeJ	MGP_C3HHeJ_G0038069	snoRNA gene	Chr1:109656449-109656580 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038944	snoRNA gene	Chr1:114325758-114325889 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035727	snoRNA gene	Chr1:100401239-100401370 (+)
CAST/EiJ	MGP_CASTEiJ_G0037215	snoRNA gene	Chr1:108605523-108605654 (+)
CBA/J	MGP_CBAJ_G0038041	snoRNA gene	Chr1:118227273-118227404 (+)
DBA/2J	MGP_DBA2J_G0038232	snoRNA gene	Chr1:105328867-105328998 (+)
FVB/NJ	MGP_FVBNJ_G0038182	snoRNA gene	Chr1:104269069-104269200 (+)
LP/J	MGP_LPJ_G0038271	snoRNA gene	Chr1:111427597-111427728 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038181	snoRNA gene	Chr1:122710199-122710330 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039053	snoRNA gene	Chr1:109215684-109215815 (+)
PWK/PhJ	MGP_PWKPhJ_G0036900	snoRNA gene	Chr1:104370473-104370604 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036658	snoRNA gene	Chr1:107884440-107884572 (+)
WSB/EiJ	MGP_WSBEiJ_G0037445	snoRNA gene	Chr1:109122909-109123040 (+)

Homology

• Gene Tree
  Gm22438
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077237 (Evidence)
• NCBI Gene
  115485786

Representative Sequences			Length	Strain/Species
genomic	115485786	NCBI Gene Model | MGI Sequence Detail	132	C57BL/6J
transcript	XR_004936805	RefSeq | MGI Sequence Detail	132	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;