Snord94 Gene Detail

Summary

• Symbol
  Snord94
• Name
  small nucleolar RNA, C/D box 94
• Synonyms
  Gm22486

• Feature Type
  snoRNA gene
• IDs
  MGI:5452263
  NCBI Gene: 115490493
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:71859541-71859677 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452263	snoRNA gene	Chr6:71859541-71859677 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039326	snoRNA gene	Chr6:72391057-72391193 (-)
A/J	MGP_AJ_G0039322	snoRNA gene	Chr6:69608350-69608486 (-)
AKR/J	MGP_AKRJ_G0039250	snoRNA gene	Chr6:71622685-71622821 (-)
BALB/cJ	MGP_BALBcJ_G0039304	snoRNA gene	Chr6:69632470-69632606 (-)
C3H/HeJ	MGP_C3HHeJ_G0038977	snoRNA gene	Chr6:112626259-112626395 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039851	snoRNA gene	Chr6:74294442-74294578 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036541	snoRNA gene	Chr6:68770634-68770770 (-)
CAST/EiJ	MGP_CASTEiJ_G0038096	snoRNA gene	Chr6:71497193-71497329 (-)
CBA/J	MGP_CBAJ_G0038935	snoRNA gene	Chr6:77276680-77276816 (-)
DBA/2J	MGP_DBA2J_G0039120	snoRNA gene	Chr6:68984926-68985062 (-)
FVB/NJ	MGP_FVBNJ_G0039077	snoRNA gene	Chr6:68368948-68369084 (-)
LP/J	MGP_LPJ_G0039165	snoRNA gene	Chr6:72309503-72309639 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039079	snoRNA gene	Chr6:80735260-80735396 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039950	snoRNA gene	Chr6:71446079-71446215 (-)
PWK/PhJ	MGP_PWKPhJ_G0037777	snoRNA gene	Chr6:67884809-67884945 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037529	snoRNA gene	Chr6:70167733-70167869 (-)
WSB/EiJ	MGP_WSBEiJ_G0038323	snoRNA gene	Chr6:71806816-71806952 (-)

Homology

• Gene Tree
  Snord94
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Snord94
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000080465 (Evidence)
• NCBI Gene
  115490493

Representative Sequences			Length	Strain/Species
genomic	115490493	NCBI Gene Model | MGI Sequence Detail	137	C57BL/6J
transcript	XR_004933953	RefSeq | MGI Sequence Detail	137	C57BL/6J

Other
Accession IDs

MGI:6404381

References

• Summaries
  All 9

  Developmental Gene Expression 1

  Phenotypes 4
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)