Gm22530 Gene Detail

Summary

• Symbol
  Gm22530
• Name
  predicted gene, 22530

• Feature Type
  snoRNA gene
  BioType Conflict
  
• IDs
  MGI:5452307
  NCBI Gene: 115486371
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:81783772-81783889 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452307	snoRNA gene	Chr6:81783772-81783889 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039329	snoRNA gene	Chr6:82767975-82768092 (+)
A/J	MGP_AJ_G0039325	snoRNA gene	Chr6:79580764-79580881 (+)
AKR/J	MGP_AKRJ_G0039253	snoRNA gene	Chr6:81881775-81881892 (+)
BALB/cJ	MGP_BALBcJ_G0039307	snoRNA gene	Chr6:79617207-79617324 (+)
C3H/HeJ	MGP_C3HHeJ_G0038974	snoRNA gene	Chr6:102477283-102477400 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039854	snoRNA gene	Chr6:85000686-85000803 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036544	snoRNA gene	Chr6:78038556-78038673 (+)
CAST/EiJ	MGP_CASTEiJ_G0038099	snoRNA gene	Chr6:81865080-81865197 (+)
CBA/J	MGP_CBAJ_G0038938	snoRNA gene	Chr6:88373752-88373869 (+)
DBA/2J	MGP_DBA2J_G0039123	snoRNA gene	Chr6:78888943-78889060 (+)
FVB/NJ	MGP_FVBNJ_G0039080	snoRNA gene	Chr6:78140265-78140382 (+)
LP/J	MGP_LPJ_G0039168	snoRNA gene	Chr6:82732319-82732436 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039082	snoRNA gene	Chr6:92721045-92721162 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039953	snoRNA gene	Chr6:81715171-81715288 (+)
PWK/PhJ	MGP_PWKPhJ_G0037780	snoRNA gene	Chr6:77808531-77808648 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037532	snoRNA gene	Chr6:80584083-80584200 (+)
WSB/EiJ	MGP_WSBEiJ_G0038326	snoRNA gene	Chr6:82157866-82157983 (+)

Homology

• Gene Tree
  Gm22530
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  1
• Spontaneous
  1
• Genomic Mutations
  2 involving Gm22530
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000089445 (Evidence)
• NCBI Gene
  115486371

Representative Sequences			Length	Strain/Species
genomic	115486371	NCBI Gene Model | MGI Sequence Detail	118	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)