Gm22680 Gene Detail

Summary

• Symbol
  Gm22680
• Name
  predicted gene, 22680

• Feature Type
  snoRNA gene
• IDs
  MGI:5452457
  NCBI Gene: 115489086
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:8702705-8702773 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452457	snoRNA gene	Chr19:8702705-8702773 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038955	snoRNA gene	Chr19:5993774-5993842 (+)
A/J	MGP_AJ_G0038950	snoRNA gene	Chr19:5677037-5677105 (+)
AKR/J	MGP_AKRJ_G0038885	snoRNA gene	Chr19:5763104-5763172 (+)
BALB/cJ	MGP_BALBcJ_G0038933	snoRNA gene	Chr19:5779816-5779884 (+)
C3H/HeJ	MGP_C3HHeJ_G0038597	snoRNA gene	Chr19:5846390-5846458 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039483	snoRNA gene	Chr19:6114067-6114135 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036208	snoRNA gene	Chr19:5917593-5917661 (+)
CAST/EiJ	MGP_CASTEiJ_G0037738	snoRNA gene	Chr19:5494197-5494266 (+)
CBA/J	MGP_CBAJ_G0038568	snoRNA gene	Chr19:6226657-6226725 (+)
DBA/2J	MGP_DBA2J_G0038757	snoRNA gene	Chr19:5507147-5507215 (+)
FVB/NJ	MGP_FVBNJ_G0038709	snoRNA gene	Chr19:5582858-5582926 (+)
LP/J	MGP_LPJ_G0038797	snoRNA gene	Chr19:5885501-5885569 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038710	snoRNA gene	Chr19:6102086-6102154 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039584	snoRNA gene	Chr19:5806490-5806558 (+)
PWK/PhJ	MGP_PWKPhJ_G0037422	snoRNA gene	Chr19:5172680-5172748 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037177	snoRNA gene	Chr19:5406207-5406275 (+)
WSB/EiJ	MGP_WSBEiJ_G0037966	snoRNA gene	Chr19:5772464-5772532 (+)

Homology

• Gene Tree
  Gm22680
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000065782 (Evidence)
• NCBI Gene
  115489086

Representative Sequences			Length	Strain/Species
genomic	115489086	NCBI Gene Model | MGI Sequence Detail	69	C57BL/6J
transcript	XR_004940306	RefSeq | MGI Sequence Detail	69	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;