Gm22788 Gene Detail

Summary

• Symbol
  Gm22788
• Name
  predicted gene, 22788

• Feature Type
  snRNA gene
• IDs
  MGI:5452565
  NCBI Gene: 115488989
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:34157273-34157333 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452565	snRNA gene	Chr18:34157273-34157333 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037664	snRNA gene	Chr18:32209190-32209250 (-)
A/J	MGP_AJ_G0037656	snRNA gene	Chr18:31118055-31118115 (-)
AKR/J	MGP_AKRJ_G0037593	snRNA gene	Chr18:31979287-31979347 (-)
BALB/cJ	MGP_BALBcJ_G0037639	snRNA gene	Chr18:31181993-31182053 (-)
C3H/HeJ	MGP_C3HHeJ_G0037311	snRNA gene	Chr18:32032438-32032498 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038165	snRNA gene	Chr18:33436051-33436111 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035089	snRNA gene	Chr18:31280923-31280983 (-)
CAST/EiJ	MGP_CASTEiJ_G0036477	snRNA gene	Chr18:31952798-31952858 (-)
CBA/J	MGP_CBAJ_G0037285	snRNA gene	Chr18:34340023-34340083 (-)
DBA/2J	MGP_DBA2J_G0037466	snRNA gene	Chr18:30781092-30781152 (-)
FVB/NJ	MGP_FVBNJ_G0037413	snRNA gene	Chr18:30477944-30478004 (-)
LP/J	MGP_LPJ_G0037519	snRNA gene	Chr18:32289819-32289879 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037427	snRNA gene	Chr18:35664723-35664783 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038274	snRNA gene	Chr18:31831843-31831903 (-)
PWK/PhJ	MGP_PWKPhJ_G0036173	snRNA gene	Chr18:30971559-30971619 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035959	snRNA gene	Chr18:32101466-32101526 (-)
WSB/EiJ	MGP_WSBEiJ_G0036693	snRNA gene	Chr18:31757442-31757502 (-)

Homology

• Gene Tree
  Gm22788
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088501 (Evidence)
• NCBI Gene
  115488989

Representative Sequences			Length	Strain/Species
genomic	115488989	NCBI Gene Model | MGI Sequence Detail	61	C57BL/6J
transcript	XR_004940095	RefSeq | MGI Sequence Detail	61	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;