Gm22789 Gene Detail

Summary

• Symbol
  Gm22789
• Name
  predicted gene, 22789

• Feature Type
  snoRNA gene
• IDs
  MGI:5452566
  NCBI Gene: 115485853
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:12642813-12642942 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  147 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452566	snoRNA gene	Chr11:12642813-12642942 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038548	snoRNA gene	Chr11:10008938-10009067 (+)
A/J	MGP_AJ_G0038538	snoRNA gene	Chr11:9653274-9653403 (+)
AKR/J	MGP_AKRJ_G0038476	snoRNA gene	Chr11:10055900-10056029 (+)
BALB/cJ	MGP_BALBcJ_G0038525	snoRNA gene	Chr11:9685929-9686058 (+)
C3H/HeJ	MGP_C3HHeJ_G0038188	snoRNA gene	Chr11:9958319-9958448 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039063	snoRNA gene	Chr11:10349629-10349758 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035841	snoRNA gene	Chr11:9176926-9177055 (+)
CAST/EiJ	MGP_CASTEiJ_G0037332	snoRNA gene	Chr11:9961562-9961690 (+)
CBA/J	MGP_CBAJ_G0038160	snoRNA gene	Chr11:11026533-11026662 (+)
DBA/2J	MGP_DBA2J_G0038350	snoRNA gene	Chr11:9573467-9573596 (+)
FVB/NJ	MGP_FVBNJ_G0038301	snoRNA gene	Chr11:9499072-9499201 (+)
LP/J	MGP_LPJ_G0038390	snoRNA gene	Chr11:10100513-10100642 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038300	snoRNA gene	Chr11:10775863-10775992 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039172	snoRNA gene	Chr11:10103743-10103872 (+)
PWK/PhJ	MGP_PWKPhJ_G0037018	snoRNA gene	Chr11:9619265-9619394 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036774	snoRNA gene	Chr11:9941350-9941477 (+)
WSB/EiJ	MGP_WSBEiJ_G0037563	snoRNA gene	Chr11:9800826-9800955 (+)

Homology

• Gene Tree
  Gm22789
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088509 (Evidence)
• NCBI Gene
  115485853

Representative Sequences			Length	Strain/Species
genomic	115485853	NCBI Gene Model | MGI Sequence Detail	130	C57BL/6J
transcript	XR_004937363	RefSeq | MGI Sequence Detail	130	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;