Gm22890 Gene Detail

Summary

• Symbol
  Gm22890
• Name
  predicted gene, 22890

• Feature Type
  snoRNA gene
• IDs
  MGI:5452667
  NCBI Gene: 115488558
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:84207410-84207553 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452667	snoRNA gene	Chr15:84207410-84207553 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038825	snoRNA gene	Chr15:85111560-85111703 (-)
A/J	MGP_AJ_G0038817	snoRNA gene	Chr15:81964727-81964870 (-)
AKR/J	MGP_AKRJ_G0038752	snoRNA gene	Chr15:84355964-84356107 (-)
BALB/cJ	MGP_BALBcJ_G0038803	snoRNA gene	Chr15:82098423-82098566 (-)
C3H/HeJ	MGP_C3HHeJ_G0038465	snoRNA gene	Chr15:84312820-84312963 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039349	snoRNA gene	Chr15:88347170-88347313 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036087	snoRNA gene	Chr15:78321460-78321604 (-)
CAST/EiJ	MGP_CASTEiJ_G0037606	snoRNA gene	Chr15:85112692-85112835 (-)
CBA/J	MGP_CBAJ_G0038437	snoRNA gene	Chr15:91209071-91209214 (-)
DBA/2J	MGP_DBA2J_G0038626	snoRNA gene	Chr15:81443002-81443145 (-)
FVB/NJ	MGP_FVBNJ_G0038580	snoRNA gene	Chr15:80495580-80495723 (-)
LP/J	MGP_LPJ_G0038666	snoRNA gene	Chr15:85262135-85262278 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038578	snoRNA gene	Chr15:96030904-96031047 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039453	snoRNA gene	Chr15:84372224-84372367 (-)
PWK/PhJ	MGP_PWKPhJ_G0037291	snoRNA gene	Chr15:81441614-81441757 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037046	snoRNA gene	Chr15:84080029-84080172 (-)
WSB/EiJ	MGP_WSBEiJ_G0037835	snoRNA gene	Chr15:84867048-84867191 (-)

Homology

• Gene Tree
  Gm22890
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  15 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm22890
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089267 (Evidence)
• NCBI Gene
  115488558

Representative Sequences			Length	Strain/Species
genomic	115488558	NCBI Gene Model | MGI Sequence Detail	144	C57BL/6J
transcript	XR_004939075	RefSeq | MGI Sequence Detail	144	C57BL/6J

References

• Summaries
  All 18

  Phenotypes 15
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27