Gm22966 Gene Detail

Summary

• Symbol
  Gm22966
• Name
  predicted gene, 22966

• Feature Type
  snoRNA gene
• IDs
  MGI:5452743
  NCBI Gene: 115485800
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:148202718-148202846 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  83 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452743	snoRNA gene	Chr1:148202718-148202846 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038446	snoRNA gene	Chr1:152919860-152919988 (-)
A/J	MGP_AJ_G0038436	snoRNA gene	Chr1:146674810-146674938 (-)
AKR/J	MGP_AKRJ_G0038374	snoRNA gene	Chr1:151235574-151235702 (-)
BALB/cJ	MGP_BALBcJ_G0038423	snoRNA gene	Chr1:147288339-147288467 (-)
C3H/HeJ	MGP_C3HHeJ_G0038086	snoRNA gene	Chr1:151439135-151439263 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038961	snoRNA gene	Chr1:158160969-158161097 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035742	snoRNA gene	Chr1:139200285-139200417 (-)
CAST/EiJ	MGP_CASTEiJ_G0037231	snoRNA gene	Chr1:150832602-150832730 (-)
CBA/J	MGP_CBAJ_G0038058	snoRNA gene	Chr1:163729903-163730031 (-)
DBA/2J	MGP_DBA2J_G0038249	snoRNA gene	Chr1:145808487-145808615 (-)
FVB/NJ	MGP_FVBNJ_G0038199	snoRNA gene	Chr1:144253431-144253559 (-)
LP/J	MGP_LPJ_G0038288	snoRNA gene	Chr1:153898256-153898384 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038198	snoRNA gene	Chr1:171046260-171046388 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039070	snoRNA gene	Chr1:151031849-151031977 (-)
PWK/PhJ	MGP_PWKPhJ_G0036916	snoRNA gene	Chr1:144728360-144728488 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036673	snoRNA gene	Chr1:149688991-149689119 (-)
WSB/EiJ	MGP_WSBEiJ_G0037462	snoRNA gene	Chr1:151120262-151120390 (-)

Homology

• Gene Tree
  Gm22966
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088582 (Evidence)
• NCBI Gene
  115485800

Representative Sequences			Length	Strain/Species
genomic	115485800	NCBI Gene Model | MGI Sequence Detail	129	C57BL/6J
transcript	XR_004936834	RefSeq | MGI Sequence Detail	129	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;