Gm22971 Gene Detail

Summary

• Symbol
  Gm22971
• Name
  predicted gene, 22971

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5452748
  NCBI Gene: 115490522
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:96446396-96446492 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452748	snRNA gene	Chr6:96446396-96446492 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038079	snRNA gene	Chr6:98290729-98290825 (-)
A/J	MGP_AJ_G0038068	snRNA gene	Chr6:94567958-94568054 (-)
AKR/J	MGP_AKRJ_G0038007	snRNA gene	Chr6:97168465-97168561 (-)
BALB/cJ	MGP_BALBcJ_G0038053	snRNA gene	Chr6:94509382-94509478 (-)
C3H/HeJ	MGP_C3HHeJ_G0037726	snRNA gene	Chr6:87255503-87255599 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038582	snRNA gene	Chr6:100743615-100743711 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035432	snRNA gene	Chr6:92449524-92449620 (-)
CAST/EiJ	MGP_CASTEiJ_G0036878	snRNA gene	Chr6:97374906-97375002 (-)
CBA/J	MGP_CBAJ_G0037699	snRNA gene	Chr6:104586093-104586189 (-)
DBA/2J	MGP_DBA2J_G0037883	snRNA gene	Chr6:93707700-93707796 (-)
FVB/NJ	MGP_FVBNJ_G0037831	snRNA gene	Chr6:92899597-92899693 (-)
LP/J	MGP_LPJ_G0037926	snRNA gene	Chr6:98303111-98303207 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037836	snRNA gene	Chr6:108544333-108544429 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038697	snRNA gene	Chr6:97044258-97044354 (-)
PWK/PhJ	MGP_PWKPhJ_G0036568	snRNA gene	Chr6:92720084-92720180 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036337	snRNA gene	Chr6:95954716-95954812 (-)
WSB/EiJ	MGP_WSBEiJ_G0037094	snRNA gene	Chr6:97514231-97514327 (-)

Homology

• Gene Tree
  Gm22971
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm22971
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000065239 (Evidence)
• NCBI Gene
  115490522

Representative Sequences			Length	Strain/Species
genomic	115490522	NCBI Gene Model | MGI Sequence Detail	97	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)