Gm23048 Gene Detail

Summary

• Symbol
  Gm23048
• Name
  predicted gene, 23048

• Feature Type
  snoRNA gene
• IDs
  MGI:5452825
  NCBI Gene: 115485717
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:19348983-19349111 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  154 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452825	snoRNA gene	Chr9:19348983-19349111 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039504	snoRNA gene	Chr9:16471968-16472096 (+)
A/J	MGP_AJ_G0039507	snoRNA gene	Chr9:16341730-16341858 (+)
AKR/J	MGP_AKRJ_G0039429	snoRNA gene	Chr9:16510995-16511123 (+)
BALB/cJ	MGP_BALBcJ_G0039484	snoRNA gene	Chr9:16168116-16168244 (+)
C3H/HeJ	MGP_C3HHeJ_G0039144	snoRNA gene	Chr9:16792518-16792646 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040035	snoRNA gene	Chr9:17154011-17154139 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036688	snoRNA gene	Chr9:15508079-15508207 (-)
CAST/EiJ	MGP_CASTEiJ_G0038272	snoRNA gene	Chr9:16598117-16598245 (+)
CBA/J	MGP_CBAJ_G0039111	snoRNA gene	Chr9:17852303-17852431 (+)
DBA/2J	MGP_DBA2J_G0039302	snoRNA gene	Chr9:16218376-16218504 (+)
FVB/NJ	MGP_FVBNJ_G0039259	snoRNA gene	Chr9:15723413-15723541 (+)
LP/J	MGP_LPJ_G0039345	snoRNA gene	Chr9:16740524-16740652 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039262	snoRNA gene	Chr9:19160958-19161086 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040133	snoRNA gene	Chr9:16475461-16475589 (+)
PWK/PhJ	MGP_PWKPhJ_G0037946	snoRNA gene	Chr9:16286663-16286791 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037700	snoRNA gene	Chr9:16551277-16551405 (+)
WSB/EiJ	MGP_WSBEiJ_G0038497	snoRNA gene	Chr9:16296567-16296695 (+)

Homology

• Gene Tree
  Gm23048
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000087862 (Evidence)
• NCBI Gene
  115485717

Representative Sequences			Length	Strain/Species
genomic	115485717	NCBI Gene Model | MGI Sequence Detail	129	C57BL/6J
transcript	XR_004935958	RefSeq | MGI Sequence Detail	129	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;