Gm23079 Gene Detail

Summary

• Symbol
  Gm23079
• Name
  predicted gene, 23079

• Feature Type
  snoRNA gene
  BioType Conflict
  
• IDs
  MGI:5452856
  NCBI Gene: 115486380
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:123785064-123785180 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  162 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452856	snoRNA gene	Chr6:123785064-123785180 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039349	snoRNA gene	Chr6:127030672-127030788 (-)
A/J	MGP_AJ_G0039346	snoRNA gene	Chr6:122170803-122170919 (-)
AKR/J	MGP_AKRJ_G0039273	snoRNA gene	Chr6:125558694-125558810 (-)
BALB/cJ	MGP_BALBcJ_G0039326	snoRNA gene	Chr6:121827353-121827469 (-)
C3H/HeJ	MGP_C3HHeJ_G0038988	snoRNA gene	Chr6:125577959-125578075 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039875	snoRNA gene	Chr6:130300361-130300477 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038119	snoRNA gene	Chr6:125797888-125798004 (-)
CBA/J	MGP_CBAJ_G0038957	snoRNA gene	Chr6:135432063-135432179 (-)
DBA/2J	MGP_DBA2J_G0039145	snoRNA gene	Chr6:121109519-121109635 (-)
FVB/NJ	MGP_FVBNJ_G0039100	snoRNA gene	Chr6:120043387-120043503 (-)
LP/J	MGP_LPJ_G0039189	snoRNA gene	Chr6:127234793-127234909 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039104	snoRNA gene	Chr6:139345887-139346003 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039974	snoRNA gene	Chr6:125455798-125455914 (-)
PWK/PhJ	MGP_PWKPhJ_G0037798	snoRNA gene	Chr6:119631132-119631248 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037552	snoRNA gene	Chr6:123568225-123568341 (+)
WSB/EiJ	MGP_WSBEiJ_G0038346	snoRNA gene	Chr6:125745629-125745745 (-)

Homology

• Gene Tree
  Gm23079
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000088472 (Evidence)
• NCBI Gene
  115486380

Representative Sequences			Length	Strain/Species
genomic	115486380	NCBI Gene Model | MGI Sequence Detail	117	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;