Gm23231 Gene Detail

Summary

• Symbol
  Gm23231
• Name
  predicted gene, 23231

• Feature Type
  snRNA gene
• IDs
  MGI:5453008
  NCBI Gene: 115490458
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:38095318-38095421 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  76 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453008	snRNA gene	Chr6:38095318-38095421 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038059	snRNA gene	Chr6:36393608-36393711 (+)
A/J	MGP_AJ_G0038049	snRNA gene	Chr6:34825351-34825454 (+)
AKR/J	MGP_AKRJ_G0037987	snRNA gene	Chr6:35936083-35936186 (+)
BALB/cJ	MGP_BALBcJ_G0038033	snRNA gene	Chr6:35014099-35014202 (+)
C3H/HeJ	MGP_C3HHeJ_G0037705	snRNA gene	Chr6:35937406-35937509 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038563	snRNA gene	Chr6:37312464-37312567 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035416	snRNA gene	Chr6:32735555-32735657 (+)
CAST/EiJ	MGP_CASTEiJ_G0036859	snRNA gene	Chr6:35830514-35830617 (+)
CBA/J	MGP_CBAJ_G0037679	snRNA gene	Chr6:38739097-38739200 (+)
DBA/2J	MGP_DBA2J_G0037863	snRNA gene	Chr6:34645308-34645411 (+)
FVB/NJ	MGP_FVBNJ_G0037811	snRNA gene	Chr6:34433320-34433423 (+)
LP/J	MGP_LPJ_G0037906	snRNA gene	Chr6:36455056-36455159 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037817	snRNA gene	Chr6:41117833-41117936 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038678	snRNA gene	Chr6:35855375-35855478 (+)
PWK/PhJ	MGP_PWKPhJ_G0036549	snRNA gene	Chr6:34293480-34293583 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036321	snRNA gene	Chr6:35575169-35575272 (+)
WSB/EiJ	MGP_WSBEiJ_G0037074	snRNA gene	Chr6:35798684-35798787 (+)

Homology

• Gene Tree
  Gm23231
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000087924 (Evidence)
• NCBI Gene
  115490458

Representative Sequences			Length	Strain/Species
genomic	115490458	NCBI Gene Model | MGI Sequence Detail	104	C57BL/6J
transcript	XR_004933873	RefSeq | MGI Sequence Detail	104	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;