Gm23270 Gene Detail

Summary

• Symbol
  Gm23270
• Name
  predicted gene, 23270

• Feature Type
  snoRNA gene
• IDs
  MGI:5453047
  NCBI Gene: 115486048
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:58748431-58748561 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  193 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453047	snoRNA gene	Chr18:58748431-58748561 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038935	snoRNA gene	Chr18:58148843-58148973 (-)
A/J	MGP_AJ_G0038930	snoRNA gene	Chr18:55812745-55812875 (-)
AKR/J	MGP_AKRJ_G0038865	snoRNA gene	Chr18:57343662-57343792 (-)
BALB/cJ	MGP_BALBcJ_G0038913	snoRNA gene	Chr18:55963711-55963841 (-)
C3H/HeJ	MGP_C3HHeJ_G0038577	snoRNA gene	Chr18:57552637-57552767 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039462	snoRNA gene	Chr18:59960202-59960332 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036191	snoRNA gene	Chr18:55378459-55378590 (-)
CAST/EiJ	MGP_CASTEiJ_G0037718	snoRNA gene	Chr18:57583128-57583258 (-)
CBA/J	MGP_CBAJ_G0038549	snoRNA gene	Chr18:61886455-61886585 (-)
DBA/2J	MGP_DBA2J_G0038737	snoRNA gene	Chr18:55501117-55501247 (-)
FVB/NJ	MGP_FVBNJ_G0038689	snoRNA gene	Chr18:54880161-54880291 (-)
LP/J	MGP_LPJ_G0038777	snoRNA gene	Chr18:58073964-58074094 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038690	snoRNA gene	Chr18:63416076-63416206 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039564	snoRNA gene	Chr18:57476463-57476593 (-)
PWK/PhJ	MGP_PWKPhJ_G0037404	snoRNA gene	Chr18:55528543-55528673 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037158	snoRNA gene	Chr18:57560090-57560221 (-)
WSB/EiJ	MGP_WSBEiJ_G0037946	snoRNA gene	Chr18:57372738-57372868 (-)

Homology

• Gene Tree
  Gm23270
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  10 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving Gm23270
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077243 (Evidence)
• NCBI Gene
  115486048

Representative Sequences			Length	Strain/Species
genomic	115486048	NCBI Gene Model | MGI Sequence Detail	131	C57BL/6J
transcript	XR_004940062	RefSeq | MGI Sequence Detail	131	C57BL/6J

References

• Summaries
  All 13

  Diseases 1

  Phenotypes 10
• Earliest
  J:208 Hertwig P, Neue Mutationen und Koppelungsgruppen bei der Hausmaus. Z Indukt Abstamm Vererbungsl. 1942;80(1):220-246
• Latest
  J:203031 Rainger J, et al., A Trans-Acting protein effect causes severe eye malformation in the Mp mouse. PLoS Genet. 2013;9(12):e1003998