Gm23318 Gene Detail

Summary

• Symbol
  Gm23318
• Name
  predicted gene, 23318

• Feature Type
  snRNA gene
• IDs
  MGI:5453095
  NCBI Gene: 115489368
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:148640154-148640261 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  38 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453095	snRNA gene	Chr4:148640154-148640261 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037957	snRNA gene	Chr4:152293225-152293332 (+)
A/J	MGP_AJ_G0037944	snRNA gene	Chr4:145989522-145989629 (+)
AKR/J	MGP_AKRJ_G0037883	snRNA gene	Chr4:149963152-149963259 (+)
BALB/cJ	MGP_BALBcJ_G0037929	snRNA gene	Chr4:146492158-146492265 (+)
C3H/HeJ	MGP_C3HHeJ_G0037603	snRNA gene	Chr4:150526118-150526225 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038458	snRNA gene	Chr4:157821368-157821475 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035334	snRNA gene	Chr4:138406510-138406617 (+)
CAST/EiJ	MGP_CASTEiJ_G0036762	snRNA gene	Chr4:147734948-147735055 (+)
CBA/J	MGP_CBAJ_G0037576	snRNA gene	Chr4:162395010-162395117 (+)
DBA/2J	MGP_DBA2J_G0037760	snRNA gene	Chr4:146094214-146094321 (+)
FVB/NJ	MGP_FVBNJ_G0037706	snRNA gene	Chr4:145186420-145186527 (+)
LP/J	MGP_LPJ_G0037806	snRNA gene	Chr4:152245601-152245708 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037718	snRNA gene	Chr4:165714841-165714948 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038570	snRNA gene	Chr4:150450515-150450622 (+)
PWK/PhJ	MGP_PWKPhJ_G0036453	snRNA gene	Chr4:142085349-142085456 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036228	snRNA gene	Chr4:144706856-144706963 (+)
WSB/EiJ	MGP_WSBEiJ_G0036977	snRNA gene	Chr4:150618810-150618917 (+)

Homology

• Gene Tree
  Gm23318
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm23318
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088625 (Evidence)
• NCBI Gene
  115489368

Representative Sequences			Length	Strain/Species
genomic	115489368	NCBI Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	XR_004942302	RefSeq | MGI Sequence Detail	108	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8