Gm23343 Gene Detail

Summary

• Symbol
  Gm23343
• Name
  predicted gene, 23343

• Feature Type
  snoRNA gene
• IDs
  MGI:5453120
  NCBI Gene: 115488559
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:44811500-44811642 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453120	snoRNA gene	Chr15:44811500-44811642 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038809	snoRNA gene	Chr15:43568193-43568335 (+)
A/J	MGP_AJ_G0038801	snoRNA gene	Chr15:41916763-41916905 (+)
AKR/J	MGP_AKRJ_G0038736	snoRNA gene	Chr15:43141921-43142063 (+)
BALB/cJ	MGP_BALBcJ_G0038787	snoRNA gene	Chr15:41987296-41987438 (+)
C3H/HeJ	MGP_C3HHeJ_G0038449	snoRNA gene	Chr15:43067066-43067208 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039333	snoRNA gene	Chr15:45256001-45256143 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036074	snoRNA gene	Chr15:39433102-39433244 (+)
CAST/EiJ	MGP_CASTEiJ_G0037591	snoRNA gene	Chr15:43577740-43577882 (+)
CBA/J	MGP_CBAJ_G0038422	snoRNA gene	Chr15:46805069-46805211 (+)
DBA/2J	MGP_DBA2J_G0038610	snoRNA gene	Chr15:41720348-41720490 (+)
FVB/NJ	MGP_FVBNJ_G0038564	snoRNA gene	Chr15:41020560-41020702 (+)
LP/J	MGP_LPJ_G0038650	snoRNA gene	Chr15:43336632-43336774 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038562	snoRNA gene	Chr15:50241046-50241188 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039436	snoRNA gene	Chr15:43339623-43339765 (+)
PWK/PhJ	MGP_PWKPhJ_G0037276	snoRNA gene	Chr15:41762093-41762235 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037031	snoRNA gene	Chr15:43022759-43022901 (+)
WSB/EiJ	MGP_WSBEiJ_G0037820	snoRNA gene	Chr15:43238949-43239091 (+)

Homology

• Gene Tree
  Gm23343
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089589 (Evidence)
• NCBI Gene
  115488559

Representative Sequences			Length	Strain/Species
genomic	115488559	NCBI Gene Model | MGI Sequence Detail	143	C57BL/6J
transcript	XR_004939076	RefSeq | MGI Sequence Detail	143	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;