Gm23378 Gene Detail

Summary

• Symbol
  Gm23378
• Name
  predicted gene, 23378

• Feature Type
  snRNA gene
• IDs
  MGI:5453155
  NCBI Gene: 115489176
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:103044979-103045085 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453155	snRNA gene	ChrX:103044979-103045085 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038332	snRNA gene	ChrX:100695784-100695890 (-)
A/J	MGP_AJ_G0038327	snRNA gene	ChrX:100591402-100591508 (-)
AKR/J	MGP_AKRJ_G0038264	snRNA gene	ChrX:103669136-103669242 (-)
BALB/cJ	MGP_BALBcJ_G0038311	snRNA gene	ChrX:99387024-99387130 (-)
C3H/HeJ	MGP_C3HHeJ_G0037977	snRNA gene	ChrX:101155477-101155583 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038848	snRNA gene	ChrX:103644568-103644674 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0037121	snRNA gene	ChrX:85407073-85407179 (-)
CBA/J	MGP_CBAJ_G0037946	snRNA gene	ChrX:106860930-106861036 (-)
DBA/2J	MGP_DBA2J_G0038138	snRNA gene	ChrX:99835893-99835999 (-)
FVB/NJ	MGP_FVBNJ_G0038085	snRNA gene	ChrX:99141248-99141354 (-)
LP/J	MGP_LPJ_G0038177	snRNA gene	ChrX:101689073-101689179 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038085	snRNA gene	ChrX:111519355-111519461 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038953	snRNA gene	ChrX:100371177-100371283 (-)
PWK/PhJ	MGP_PWKPhJ_G0036812	snRNA gene	ChrX:82981403-82981509 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036572	snRNA gene	ChrX:86118651-86118757 (-)
WSB/EiJ	MGP_WSBEiJ_G0037349	snRNA gene	ChrX:99103001-99103107 (-)

Homology

• Gene Tree
  Gm23378
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000064876 (Evidence)
• NCBI Gene
  115489176

Representative Sequences			Length	Strain/Species
genomic	115489176	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004940484	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;