Gm23404 Gene Detail

Summary

• Symbol
  Gm23404
• Name
  predicted gene, 23404

• Feature Type
  snoRNA gene
  BioType Conflict
  
• IDs
  MGI:5453181
  NCBI Gene: 115489216
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:155238995-155239091 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453181	snoRNA gene	ChrX:155238995-155239091 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039621	snoRNA gene	ChrX:154350405-154350501 (-)
A/J	MGP_AJ_G0039622	snoRNA gene	ChrX:153617636-153617732 (-)
AKR/J	MGP_AKRJ_G0039548	snoRNA gene	ChrX:158502155-158502251 (-)
BALB/cJ	MGP_BALBcJ_G0039597	snoRNA gene	ChrX:151708768-151708864 (-)
C3H/HeJ	MGP_C3HHeJ_G0039258	snoRNA gene	ChrX:154686783-154686879 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040150	snoRNA gene	ChrX:158861438-158861534 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036785	snoRNA gene	ChrX:145087232-145087325 (-)
CAST/EiJ	MGP_CASTEiJ_G0038384	snoRNA gene	ChrX:133815113-133815209 (-)
CBA/J	MGP_CBAJ_G0039228	snoRNA gene	ChrX:163396259-163396355 (-)
DBA/2J	MGP_DBA2J_G0039420	snoRNA gene	ChrX:152643693-152643789 (-)
FVB/NJ	MGP_FVBNJ_G0039377	snoRNA gene	ChrX:151739358-151739454 (-)
LP/J	MGP_LPJ_G0039463	snoRNA gene	ChrX:155456161-155456257 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039376	snoRNA gene	ChrX:171922065-171922161 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040250	snoRNA gene	ChrX:153902562-153902658 (-)
PWK/PhJ	MGP_PWKPhJ_G0038061	snoRNA gene	ChrX:130789377-130789473 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037810	snoRNA gene	ChrX:134287535-134287631 (-)
WSB/EiJ	MGP_WSBEiJ_G0038611	snoRNA gene	ChrX:151880120-151880216 (-)

Homology

• Gene Tree
  Gm23404
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000064477 (Evidence)
• NCBI Gene
  115489216

Representative Sequences			Length	Strain/Species
genomic	115489216	NCBI Gene Model | MGI Sequence Detail	97	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;