Gm23475 Gene Detail

Summary

• Symbol
  Gm23475
• Name
  predicted gene, 23475

• Feature Type
  snRNA gene
• IDs
  MGI:5453252
  NCBI Gene: 115488546
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:58006604-58006665 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453252	snRNA gene	Chr15:58006604-58006665 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037523	snRNA gene	Chr15:57304548-57304609 (-)
A/J	MGP_AJ_G0037519	snRNA gene	Chr15:55055505-55055566 (-)
AKR/J	MGP_AKRJ_G0037459	snRNA gene	Chr15:56583294-56583355 (-)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0037183	snRNA gene	Chr15:56706048-56706109 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038024	snRNA gene	Chr15:59541890-59541951 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034985	snRNA gene	Chr15:52158518-52158578 (-)
CAST/EiJ	MGP_CASTEiJ_G0036354	snRNA gene	Chr15:57346756-57346817 (-)
CBA/J	MGP_CBAJ_G0037155	snRNA gene	Chr15:61597989-61598050 (-)
DBA/2J	MGP_DBA2J_G0037333	snRNA gene	Chr15:54980971-54981032 (-)
FVB/NJ	MGP_FVBNJ_G0037279	snRNA gene	Chr15:54034242-54034303 (-)
LP/J	MGP_LPJ_G0037382	snRNA gene	Chr15:57153370-57153431 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0038137	snRNA gene	Chr15:56994294-56994355 (-)
PWK/PhJ	MGP_PWKPhJ_G0036046	snRNA gene	Chr15:54982258-54982319 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035837	snRNA gene	Chr15:56763005-56763065 (-)
WSB/EiJ	MGP_WSBEiJ_G0036565	snRNA gene	Chr15:56980455-56980516 (-)

Homology

• Gene Tree
  Gm23475
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000089504 (Evidence)
• NCBI Gene
  115488546

Representative Sequences			Length	Strain/Species
genomic	115488546	NCBI Gene Model | MGI Sequence Detail	62	C57BL/6J
transcript	XR_004939064	RefSeq | MGI Sequence Detail	62	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;