Gm23485 Gene Detail

Summary

• Symbol
  Gm23485
• Name
  predicted gene, 23485

• Feature Type
  snRNA gene
• IDs
  MGI:5453262
  NCBI Gene: 115490489
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:71016563-71016717 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453262	snRNA gene	Chr6:71016561-71016717 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038072	snRNA gene	Chr6:71488909-71489063 (-)
A/J	MGP_AJ_G0038061	snRNA gene	Chr6:68750621-68750775 (-)
AKR/J	MGP_AKRJ_G0038000	snRNA gene	Chr6:70724359-70724513 (-)
BALB/cJ	MGP_BALBcJ_G0038046	snRNA gene	Chr6:68780229-68780383 (-)
C3H/HeJ	MGP_C3HHeJ_G0037733	snRNA gene	Chr6:113526994-113527148 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038575	snRNA gene	Chr6:73374439-73374593 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035427	snRNA gene	Chr6:67932422-67932576 (-)
CAST/EiJ	MGP_CASTEiJ_G0036871	snRNA gene	Chr6:70568516-70568670 (-)
CBA/J	MGP_CBAJ_G0037692	snRNA gene	Chr6:76284173-76284327 (-)
DBA/2J	MGP_DBA2J_G0037876	snRNA gene	Chr6:68121492-68121646 (-)
FVB/NJ	MGP_FVBNJ_G0037824	snRNA gene	Chr6:67491857-67492011 (-)
LP/J	MGP_LPJ_G0037919	snRNA gene	Chr6:71420925-71421079 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037829	snRNA gene	Chr6:79797125-79797279 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038690	snRNA gene	Chr6:70568838-70568992 (-)
PWK/PhJ	MGP_PWKPhJ_G0036561	snRNA gene	Chr6:66987718-66987872 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036330	snRNA gene	Chr6:69287829-69287983 (-)
WSB/EiJ	MGP_WSBEiJ_G0037087	snRNA gene	Chr6:70903681-70903835 (-)

Homology

• Gene Tree
  Gm23485
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077369 (Evidence)
• NCBI Gene
  115490489

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000077369	Ensembl Gene Model | MGI Sequence Detail	155	C57BL/6J
transcript	ENSMUST00000104181	Ensembl | MGI Sequence Detail	155	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;