Gm23507 Gene Detail

Summary

• Symbol
  Gm23507
• Name
  predicted gene, 23507

• Feature Type
  snRNA gene
• IDs
  MGI:5453284
  NCBI Gene: 115487845
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:88795947-88796053 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  54 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453284	snRNA gene	Chr11:88795947-88796053 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037341	snRNA gene	Chr11:90662956-90663062 (+)
A/J	MGP_AJ_G0037327	snRNA gene	Chr11:87130936-87131042 (+)
AKR/J	MGP_AKRJ_G0037272	snRNA gene	Chr11:89791341-89791447 (+)
BALB/cJ	MGP_BALBcJ_G0037317	snRNA gene	Chr11:87546449-87546555 (+)
C3H/HeJ	MGP_C3HHeJ_G0037001	snRNA gene	Chr11:89812449-89812555 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037832	snRNA gene	Chr11:93417032-93417138 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0036178	snRNA gene	Chr11:90519860-90519966 (+)
CBA/J	MGP_CBAJ_G0036973	snRNA gene	Chr11:97402537-97402643 (+)
DBA/2J	MGP_DBA2J_G0037150	snRNA gene	Chr11:86683522-86683628 (+)
FVB/NJ	MGP_FVBNJ_G0037099	snRNA gene	Chr11:86187939-86188045 (+)
LP/J	MGP_LPJ_G0037199	snRNA gene	Chr11:91172701-91172807 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037109	snRNA gene	Chr11:97328419-97328525 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037950	snRNA gene	Chr11:90002819-90002925 (+)
PWK/PhJ	MGP_PWKPhJ_G0035876	snRNA gene	Chr11:87534912-87535018 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035674	snRNA gene	Chr11:89581733-89581827 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm23507
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  3
• Targeted
  3
• Genomic Mutations
  3 involving Gm23507
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000065012 (Evidence)
• NCBI Gene
  115487845

Representative Sequences			Length	Strain/Species
genomic	115487845	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004937298	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 9

  Diseases 1

  Phenotypes 6
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52