Gm23517 Gene Detail

Summary

• Symbol
  Gm23517
• Name
  predicted gene, 23517

• Feature Type
  snRNA gene
• IDs
  MGI:5453294
  NCBI Gene: 115488566
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:85235264-85235455 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453294	snRNA gene	Chr15:85235264-85235455 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037542	snRNA gene	Chr15:86210802-86210993 (-)
A/J	MGP_AJ_G0037538	snRNA gene	Chr15:83006574-83006765 (-)
AKR/J	MGP_AKRJ_G0037476	snRNA gene	Chr15:85453471-85453662 (-)
BALB/cJ	MGP_BALBcJ_G0037524	snRNA gene	Chr15:83134504-83134695 (-)
C3H/HeJ	MGP_C3HHeJ_G0037201	snRNA gene	Chr15:85398658-85398849 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038042	snRNA gene	Chr15:89458703-89458894 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035001	snRNA gene	Chr15:79341606-79341795 (-)
CAST/EiJ	MGP_CASTEiJ_G0036372	snRNA gene	Chr15:86194415-86194606 (-)
CBA/J	MGP_CBAJ_G0037173	snRNA gene	Chr15:92415697-92415888 (-)
DBA/2J	MGP_DBA2J_G0037352	snRNA gene	Chr15:82475789-82475980 (-)
FVB/NJ	MGP_FVBNJ_G0037297	snRNA gene	Chr15:81544285-81544476 (-)
LP/J	MGP_LPJ_G0037401	snRNA gene	Chr15:86382250-86382441 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037310	snRNA gene	Chr15:97134266-97134457 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038157	snRNA gene	Chr15:85456648-85456839 (-)
PWK/PhJ	MGP_PWKPhJ_G0036063	snRNA gene	Chr15:82485350-82485541 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035854	snRNA gene	Chr15:85149863-85150054 (-)
WSB/EiJ	MGP_WSBEiJ_G0036582	snRNA gene	Chr15:85952369-85952560 (-)

Homology

• Gene Tree
  Gm23517
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  15 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm23517
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000064764 (Evidence)
• NCBI Gene
  115488566

Representative Sequences			Length	Strain/Species
genomic	115488566	NCBI Gene Model | MGI Sequence Detail	192	C57BL/6J
transcript	XR_004939104	RefSeq | MGI Sequence Detail	192	C57BL/6J

References

• Summaries
  All 18

  Phenotypes 15
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27