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Gm23540 Gene Detail
Summary
  • Symbol
    Gm23540
  • Name
    predicted gene, 23540
  • Feature Type
    snRNA gene
  • IDs
    MGI:5453317
    NCBI Gene: 115490045
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:120941183-120941346 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    80 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5453317
 snRNA gene Chr4:120941183-120941346 (-)
129S1/SvImJ MGP_129S1SvImJ_G0037935
 snRNA gene Chr4:122390811-122390974 (-)
A/J MGP_AJ_G0037921
 snRNA gene Chr4:117554895-117555058 (-)
AKR/J MGP_AKRJ_G0037860
 snRNA gene Chr4:120153203-120153366 (-)
BALB/cJ MGP_BALBcJ_G0037906
 snRNA gene Chr4:118170662-118170825 (-)
C3H/HeJ MGP_C3HHeJ_G0037580
 snRNA gene Chr4:121678116-121678279 (-)
C57BL/6NJ MGP_C57BL6NJ_G0038435
 snRNA gene Chr4:126997532-126997695 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0035314
 snRNA gene Chr4:111599518-111599682 (-)
CAST/EiJ MGP_CASTEiJ_G0036739
 snRNA gene Chr4:119052438-119052601 (-)
CBA/J MGP_CBAJ_G0037553
 snRNA gene Chr4:130449628-130449791 (-)
DBA/2J MGP_DBA2J_G0037737
 snRNA gene Chr4:118131283-118131446 (-)
FVB/NJ MGP_FVBNJ_G0037684
 snRNA gene Chr4:116657045-116657208 (-)
LP/J MGP_LPJ_G0037783
 snRNA gene Chr4:122510497-122510660 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0037695
 snRNA gene Chr4:135242932-135243095 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0038547
 snRNA gene Chr4:121221529-121221692 (-)
PWK/PhJ MGP_PWKPhJ_G0036430
 snRNA gene Chr4:115083813-115083976 (-)
SPRET/EiJ MGP_SPRETEiJ_G0036205
 snRNA gene Chr4:117648266-117648428 (-)
WSB/EiJ MGP_WSBEiJ_G0036954
 snRNA gene Chr4:121242311-121242474 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 115490045 NCBI Gene Model | MGI Sequence Detail 164 C57BL/6J ±  kb
transcript XR_004942329 RefSeq | MGI Sequence Detail 164 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 3
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory