Gm23555 Gene Detail

Summary

• Symbol
  Gm23555
• Name
  predicted gene, 23555

• Feature Type
  snoRNA gene
• IDs
  MGI:5453332
  NCBI Gene: 115486062
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:56326071-56326205 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453332	snoRNA gene	Chr18:56326071-56326205 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038934	snoRNA gene	Chr18:55530232-55530366 (+)
A/J	MGP_AJ_G0038929	snoRNA gene	Chr18:53349949-53350083 (+)
AKR/J	MGP_AKRJ_G0038864	snoRNA gene	Chr18:54814505-54814639 (+)
BALB/cJ	MGP_BALBcJ_G0038912	snoRNA gene	Chr18:53536270-53536404 (+)
C3H/HeJ	MGP_C3HHeJ_G0038576	snoRNA gene	Chr18:55015497-55015631 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039461	snoRNA gene	Chr18:57306977-57307111 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0037717	snoRNA gene	Chr18:55037738-55037872 (+)
CBA/J	MGP_CBAJ_G0038548	snoRNA gene	Chr18:59081812-59081946 (+)
DBA/2J	MGP_DBA2J_G0038736	snoRNA gene	Chr18:53045214-53045348 (+)
FVB/NJ	MGP_FVBNJ_G0038688	snoRNA gene	Chr18:52458118-52458252 (+)
LP/J	MGP_LPJ_G0038776	snoRNA gene	Chr18:55517239-55517373 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038689	snoRNA gene	Chr18:60787501-60787635 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039563	snoRNA gene	Chr18:54902242-54902376 (+)
PWK/PhJ	MGP_PWKPhJ_G0037403	snoRNA gene	Chr18:53069878-53070012 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037157	snoRNA gene	Chr18:55022217-55022351 (+)
WSB/EiJ	MGP_WSBEiJ_G0037945	snoRNA gene	Chr18:54844698-54844832 (+)

Homology

• Gene Tree
  Gm23555
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm23555
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000088440 (Evidence)
• NCBI Gene
  115486062

Representative Sequences			Length	Strain/Species
genomic	115486062	NCBI Gene Model | MGI Sequence Detail	135	C57BL/6J
transcript	XR_004940073	RefSeq | MGI Sequence Detail	135	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67