Gm23680 Gene Detail

Summary

• Symbol
  Gm23680
• Name
  predicted gene, 23680

• Feature Type
  snRNA gene
• IDs
  MGI:5453457
  NCBI Gene: 115487526
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:12239154-12239317 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453457	snRNA gene	Chr10:12239154-12239317 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037224	snRNA gene	Chr10:9725386-9725550 (+)
A/J	MGP_AJ_G0037211	snRNA gene	Chr10:9311058-9311222 (+)
AKR/J	MGP_AKRJ_G0037157	snRNA gene	Chr10:9568345-9568509 (+)
BALB/cJ	MGP_BALBcJ_G0037203	snRNA gene	Chr10:9358458-9358622 (+)
C3H/HeJ	MGP_C3HHeJ_G0036885	snRNA gene	Chr10:9711822-9711986 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037716	snRNA gene	Chr10:9999955-10000118 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034743	snRNA gene	Chr10:8622036-8622197 (+)
CAST/EiJ	MGP_CASTEiJ_G0036069	snRNA gene	Chr10:9548366-9548532 (+)
CBA/J	MGP_CBAJ_G0036860	snRNA gene	Chr10:10347866-10348030 (+)
DBA/2J	MGP_DBA2J_G0037036	snRNA gene	Chr10:9257904-9258068 (+)
FVB/NJ	MGP_FVBNJ_G0036986	snRNA gene	Chr10:9104634-9104797 (+)
LP/J	MGP_LPJ_G0037084	snRNA gene	Chr10:9576306-9576470 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036997	snRNA gene	Chr10:10292742-10292906 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037833	snRNA gene	Chr10:9463260-9463424 (+)
PWK/PhJ	MGP_PWKPhJ_G0035765	snRNA gene	Chr10:9125931-9126097 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035568	snRNA gene	Chr10:9565631-9565796 (+)
WSB/EiJ	MGP_WSBEiJ_G0036276	snRNA gene	Chr10:9491537-9491703 (+)

Homology

• Gene Tree
  Gm23680
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000065096 (Evidence)
• NCBI Gene
  115487526

Representative Sequences			Length	Strain/Species
genomic	115487526	NCBI Gene Model | MGI Sequence Detail	164	C57BL/6J
transcript	XR_004936585	RefSeq | MGI Sequence Detail	164	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;