Mir1231 Gene Detail

Summary

• Symbol
  Mir1231
• Name
  microRNA 1231
• Synonyms
  mmu-mir-1231

• Feature Type
  miRNA gene
• IDs
  MGI:5453497
  NCBI Gene: 100885827
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:135382341-135382421 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453497	miRNA gene	Chr1:135382341-135382421 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0007662	miRNA gene	Chr1:139223106-139223186 (-)
A/J	MGP_AJ_G0007657	miRNA gene	Chr1:133959455-133959535 (-)
AKR/J	MGP_AKRJ_G0007631	miRNA gene	Chr1:137939087-137939167 (-)
BALB/cJ	MGP_BALBcJ_G0007635	miRNA gene	Chr1:134272432-134272512 (-)
C3H/HeJ	MGP_C3HHeJ_G0007580	miRNA gene	Chr1:138037938-138038018 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007810	miRNA gene	Chr1:144254365-144254445 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006973	miRNA gene	Chr1:127061077-127061157 (-)
CAST/EiJ	MGP_CASTEiJ_G0007476	miRNA gene	Chr1:137124747-137124827 (-)
CBA/J	MGP_CBAJ_G0007555	miRNA gene	Chr1:149250323-149250403 (-)
DBA/2J	MGP_DBA2J_G0007589	miRNA gene	Chr1:132952220-132952300 (-)
FVB/NJ	MGP_FVBNJ_G0007603	miRNA gene	Chr1:131595404-131595484 (-)
LP/J	MGP_LPJ_G0007668	miRNA gene	Chr1:140456991-140457071 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007577	miRNA gene	Chr1:154908106-154908186 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007810	miRNA gene	Chr1:137708363-137708443 (-)
PWK/PhJ	MGP_PWKPhJ_G0007408	miRNA gene	Chr1:131981546-131981626 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0007311	miRNA gene	Chr1:136673767-136673847 (-)
WSB/EiJ	MGP_WSBEiJ_G0007544	miRNA gene	Chr1:137737630-137737710 (-)

Homology

• Human Ortholog
  MIR1231, microRNA 1231

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  MIR1231, microRNA 1231
  
• Synonyms
  hsa-mir-1231, MIRN1231
• Links
  HGNC:33921

  NCBI Gene ID: 100302158

  
  
• Chr Location
  chr1:201808611-201808702 (+)  GRCh38

---

• MGI Vertebrate Homology
  Mir1231 stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: MIR1231
• Gene Tree
  Mir1231
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Mir1231
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000093515 (Evidence)
• NCBI Gene
  100885827

Representative Sequences			Length	Strain/Species
genomic	100885827	NCBI Gene Model | MGI Sequence Detail	81	C57BL/6J
transcript	NR_049188	RefSeq | MGI Sequence Detail	81	ZRU/MplStud

Other Database
Links

miRBase

MI0019183

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4