Gm23887 Gene Detail

Summary

• Symbol
  Gm23887
• Name
  predicted gene, 23887

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5453664
  NCBI Gene: 115488854
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:29208951-29209122 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  16 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453664	snRNA gene	Chr17:29208951-29209122 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037618	snRNA gene	Chr17:28478196-28478367 (-)
A/J	MGP_AJ_G0037612	snRNA gene	Chr17:27498659-27498830 (-)
AKR/J	MGP_AKRJ_G0037550	snRNA gene	Chr17:27725633-27725804 (-)
BALB/cJ	MGP_BALBcJ_G0037596	snRNA gene	Chr17:27781115-27781286 (-)
C3H/HeJ	MGP_C3HHeJ_G0037270	snRNA gene	Chr17:28113984-28114155 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038118	snRNA gene	Chr17:29606138-29606309 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035053	snRNA gene	Chr17:24849788-24849959 (-)
CAST/EiJ	MGP_CASTEiJ_G0036437	snRNA gene	Chr17:28092393-28092564 (-)
CBA/J	MGP_CBAJ_G0037243	snRNA gene	Chr17:30688110-30688281 (-)
DBA/2J	MGP_DBA2J_G0037423	snRNA gene	Chr17:27044996-27045167 (-)
FVB/NJ	MGP_FVBNJ_G0037369	snRNA gene	Chr17:26872496-26872667 (-)
LP/J	MGP_LPJ_G0037475	snRNA gene	Chr17:28728347-28728518 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037384	snRNA gene	Chr17:30064686-30064857 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038229	snRNA gene	Chr17:28176783-28176954 (-)
PWK/PhJ	MGP_PWKPhJ_G0036128	snRNA gene	Chr17:25874565-25874736 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035915	snRNA gene	Chr17:26184121-26184284 (-)
WSB/EiJ	MGP_WSBEiJ_G0036652	snRNA gene	Chr17:28151803-28151974 (-)

Homology

• Gene Tree
  Gm23887
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000084632 (Evidence)
• NCBI Gene
  115488854

Representative Sequences			Length	Strain/Species
genomic	115488854	NCBI Gene Model | MGI Sequence Detail	172	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;