Gm23951 Gene Detail

Summary

• Symbol
  Gm23951
• Name
  predicted gene, 23951

• Feature Type
  snoRNA gene
• IDs
  MGI:5453728
  NCBI Gene: 115485840
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:83257696-83257827 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453728	snoRNA gene	Chr11:83257696-83257827 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038594	snoRNA gene	Chr11:84687658-84687789 (-)
A/J	MGP_AJ_G0038585	snoRNA gene	Chr11:81475148-81475279 (-)
AKR/J	MGP_AKRJ_G0038521	snoRNA gene	Chr11:83902449-83902580 (-)
BALB/cJ	MGP_BALBcJ_G0038571	snoRNA gene	Chr11:81888309-81888440 (-)
C3H/HeJ	MGP_C3HHeJ_G0038233	snoRNA gene	Chr11:83954251-83954382 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039110	snoRNA gene	Chr11:87286236-87286367 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0037379	snoRNA gene	Chr11:84536822-84536953 (-)
CBA/J	MGP_CBAJ_G0038205	snoRNA gene	Chr11:91061284-91061415 (-)
DBA/2J	MGP_DBA2J_G0038395	snoRNA gene	Chr11:81073223-81073354 (-)
FVB/NJ	MGP_FVBNJ_G0038346	snoRNA gene	Chr11:80555770-80555901 (-)
LP/J	MGP_LPJ_G0038434	snoRNA gene	Chr11:85246216-85246347 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038346	snoRNA gene	Chr11:91226867-91226998 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039218	snoRNA gene	Chr11:84167978-84168109 (-)
PWK/PhJ	MGP_PWKPhJ_G0037064	snoRNA gene	Chr11:81832748-81832879 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036819	snoRNA gene	Chr11:83708708-83708839 (-)
WSB/EiJ	MGP_WSBEiJ_G0037608	snoRNA gene	Chr11:84035269-84035400 (-)

Homology

• Gene Tree
  Gm23951
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm23951
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000077217 (Evidence)
• NCBI Gene
  115485840

Representative Sequences			Length	Strain/Species
genomic	115485840	NCBI Gene Model | MGI Sequence Detail	132	C57BL/6J
transcript	XR_004937354	RefSeq | MGI Sequence Detail	132	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52