Gm23969 Gene Detail

Summary

• Symbol
  Gm23969
• Name
  predicted gene, 23969

• Feature Type
  snoRNA gene
• IDs
  MGI:5453746
  NCBI Gene: 115489598
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:26801273-26801346 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453746	snoRNA gene	Chr2:26801273-26801346 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038989	snoRNA gene	Chr2:24882904-24882977 (+)
A/J	MGP_AJ_G0038984	snoRNA gene	Chr2:23938793-23938866 (+)
AKR/J	MGP_AKRJ_G0038920	snoRNA gene	Chr2:24719343-24719416 (+)
BALB/cJ	MGP_BALBcJ_G0038967	snoRNA gene	Chr2:24055230-24055303 (+)
C3H/HeJ	MGP_C3HHeJ_G0038631	snoRNA gene	Chr2:24658108-24658181 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039517	snoRNA gene	Chr2:25719264-25719337 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0037771	snoRNA gene	Chr2:24535180-24535253 (+)
CBA/J	MGP_CBAJ_G0038602	snoRNA gene	Chr2:26612941-26613014 (+)
DBA/2J	MGP_DBA2J_G0038791	snoRNA gene	Chr2:23755346-23755419 (+)
FVB/NJ	MGP_FVBNJ_G0038743	snoRNA gene	Chr2:23510512-23510585 (+)
LP/J	MGP_LPJ_G0038831	snoRNA gene	Chr2:24827063-24827136 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038743	snoRNA gene	Chr2:26675615-26675688 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039617	snoRNA gene	Chr2:24660705-24660778 (+)
PWK/PhJ	MGP_PWKPhJ_G0037456	snoRNA gene	Chr2:23549210-23549283 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037210	snoRNA gene	Chr2:24813097-24813170 (+)
WSB/EiJ	MGP_WSBEiJ_G0037999	snoRNA gene	Chr2:24778080-24778153 (+)

Homology

• Gene Tree
  Gm23969
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000065258 (Evidence)
• NCBI Gene
  115489598

Representative Sequences			Length	Strain/Species
genomic	115489598	NCBI Gene Model | MGI Sequence Detail	74	C57BL/6J
transcript	XR_004941168	RefSeq | MGI Sequence Detail	74	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;