Gm23994 Gene Detail

Summary

• Symbol
  Gm23994
• Name
  predicted gene, 23994

• Feature Type
  snoRNA gene
  BioType Conflict
  
• IDs
  MGI:5453771
  NCBI Gene: 115486026
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:87558444-87558531 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453771	snoRNA gene	Chr16:87558444-87558531 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038880	snoRNA gene	Chr16:88507659-88507746 (-)
A/J	MGP_AJ_G0038874	snoRNA gene	Chr16:84419711-84419798 (-)
AKR/J	MGP_AKRJ_G0038810	snoRNA gene	Chr16:86991168-86991255 (-)
BALB/cJ	MGP_BALBcJ_G0038858	snoRNA gene	Chr16:84950741-84950828 (-)
C3H/HeJ	MGP_C3HHeJ_G0038522	snoRNA gene	Chr16:87556188-87556275 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039406	snoRNA gene	Chr16:91374765-91374852 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036142	snoRNA gene	Chr16:82269751-82269838 (-)
CAST/EiJ	MGP_CASTEiJ_G0037663	snoRNA gene	Chr16:87944675-87944762 (-)
CBA/J	MGP_CBAJ_G0038494	snoRNA gene	Chr16:95289140-95289227 (-)
DBA/2J	MGP_DBA2J_G0038682	snoRNA gene	Chr16:84348802-84348889 (-)
FVB/NJ	MGP_FVBNJ_G0038635	snoRNA gene	Chr16:83448466-83448553 (-)
LP/J	MGP_LPJ_G0038721	snoRNA gene	Chr16:88187902-88187989 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038634	snoRNA gene	Chr16:99842800-99842887 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039509	snoRNA gene	Chr16:87464079-87464166 (-)
PWK/PhJ	MGP_PWKPhJ_G0037348	snoRNA gene	Chr16:84471151-84471238 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037104	snoRNA gene	Chr16:87001640-87001723 (-)
WSB/EiJ	MGP_WSBEiJ_G0037891	snoRNA gene	Chr16:87696196-87696283 (-)

Homology

• Gene Tree
  Gm23994
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  3
• Targeted
  2
• Genomic Mutations
  3 involving Gm23994
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000088684 (Evidence)
• NCBI Gene
  115486026

Representative Sequences			Length	Strain/Species
genomic	115486026	NCBI Gene Model | MGI Sequence Detail	88	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76
• Latest
  J:335294 Redhead Y, et al., Craniofacial dysmorphology in Down syndrome is caused by increased dosage of Dyrk1a and at least three other genes. Development. 2023 Apr 15;150(8):dev201077