Gm24006 Gene Detail

Summary

• Symbol
  Gm24006
• Name
  predicted gene, 24006

• Feature Type
  snoRNA gene
• IDs
  MGI:5453783
  NCBI Gene: 115486076
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:35180635-35180766 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453783	snoRNA gene	Chr19:35180635-35180766 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038969	snoRNA gene	Chr19:34012409-34012540 (+)
A/J	MGP_AJ_G0038964	snoRNA gene	Chr19:32368622-32368753 (+)
AKR/J	MGP_AKRJ_G0038899	snoRNA gene	Chr19:33477285-33477416 (+)
BALB/cJ	MGP_BALBcJ_G0038947	snoRNA gene	Chr19:32473430-32473561 (+)
C3H/HeJ	MGP_C3HHeJ_G0038611	snoRNA gene	Chr19:33549856-33549987 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039497	snoRNA gene	Chr19:35004797-35004928 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036218	snoRNA gene	Chr19:31771463-31771593 (+)
CAST/EiJ	MGP_CASTEiJ_G0037751	snoRNA gene	Chr19:33329483-33329614 (+)
CBA/J	MGP_CBAJ_G0038582	snoRNA gene	Chr19:36649827-36649958 (+)
DBA/2J	MGP_DBA2J_G0038771	snoRNA gene	Chr19:32250455-32250586 (+)
FVB/NJ	MGP_FVBNJ_G0038723	snoRNA gene	Chr19:32083123-32083254 (+)
LP/J	MGP_LPJ_G0038811	snoRNA gene	Chr19:34112958-34113089 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038723	snoRNA gene	Chr19:36412523-36412654 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039597	snoRNA gene	Chr19:33548836-33548967 (+)
PWK/PhJ	MGP_PWKPhJ_G0037435	snoRNA gene	Chr19:32071160-32071291 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037190	snoRNA gene	Chr19:32431359-32431490 (+)
WSB/EiJ	MGP_WSBEiJ_G0037979	snoRNA gene	Chr19:33630068-33630199 (+)

Homology

• Gene Tree
  Gm24006
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm24006
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089087 (Evidence)
• NCBI Gene
  115486076

Representative Sequences			Length	Strain/Species
genomic	115486076	NCBI Gene Model | MGI Sequence Detail	132	C57BL/6J
transcript	XR_004940277	RefSeq | MGI Sequence Detail	132	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:93237 Nobrega MA, et al., Megabase deletions of gene deserts result in viable mice. Nature. 2004 Oct 21;431(7011):988-93