Gm24195 Gene Detail

Summary

• Symbol
  Gm24195
• Name
  predicted gene, 24195

• Feature Type
  miRNA gene
• IDs
  MGI:5453972
  NCBI Gene: 114483555
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:54725952-54726034 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453972	miRNA gene	Chr13:54725926-54726062 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008068	miRNA gene	Chr13:53982489-53982625 (+)
A/J	MGP_AJ_G0008057	miRNA gene	Chr13:52003123-52003259 (+)
AKR/J	MGP_AKRJ_G0008035	miRNA gene	Chr13:53532626-53532762 (+)
BALB/cJ	MGP_BALBcJ_G0008038	miRNA gene	Chr13:52234784-52234920 (+)
C3H/HeJ	MGP_C3HHeJ_G0007982	miRNA gene	Chr13:53357177-53357313 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008222	miRNA gene	Chr13:55638994-55639130 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007331	miRNA gene	Chr13:49998079-49998224 (+)
CAST/EiJ	MGP_CASTEiJ_G0007868	miRNA gene	Chr13:53436346-53436482 (+)
CBA/J	MGP_CBAJ_G0007952	miRNA gene	Chr13:57751804-57751940 (+)
DBA/2J	MGP_DBA2J_G0007986	miRNA gene	Chr13:51571568-51571704 (+)
FVB/NJ	MGP_FVBNJ_G0008007	miRNA gene	Chr13:51019393-51019529 (+)
LP/J	MGP_LPJ_G0008068	miRNA gene	Chr13:54259314-54259450 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007979	miRNA gene	Chr13:57247895-57248031 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008222	miRNA gene	Chr13:53127022-53127158 (+)
PWK/PhJ	MGP_PWKPhJ_G0007785	miRNA gene	Chr13:51557184-51557320 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007682	miRNA gene	Chr13:52040868-52041002 (+)
WSB/EiJ	MGP_WSBEiJ_G0007937	miRNA gene	Chr13:53464811-53464947 (+)

Homology

• Gene Tree
  Gm24195
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm24195
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000080454 (Evidence)
• NCBI Gene
  114483555

Representative Sequences			Length	Strain/Species
genomic	114483555	NCBI Gene Model | MGI Sequence Detail	83	C57BL/6J
transcript	NR_162773	RefSeq | MGI Sequence Detail	83	ZRU/MplStud

References

• Summaries
  All 4

  Diseases 1

  Phenotypes 1
• Earliest
  J:190741 Migdalska AM, et al., Generation of the Sotos syndrome deletion in mice. Mamm Genome. 2012 Dec;23(11-12):749-57

TSS for Gm24195:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr119876	Chr13:54725715-54725731 (+)	-229 bp