Gm24198 Gene Detail

Summary

• Symbol
  Gm24198
• Name
  predicted gene, 24198

• Feature Type
  snRNA gene
• IDs
  MGI:5453975
  NCBI Gene: 115487859
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:54348990-54349095 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  66 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453975	snRNA gene	Chr11:54348988-54349095 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037308	snRNA gene	Chr11:53933072-53933179 (+)
A/J	MGP_AJ_G0037294	snRNA gene	Chr11:51920539-51920646 (+)
AKR/J	MGP_AKRJ_G0037240	snRNA gene	Chr11:53623427-53623534 (+)
BALB/cJ	MGP_BALBcJ_G0037285	snRNA gene	Chr11:52263308-52263415 (+)
C3H/HeJ	MGP_C3HHeJ_G0036968	snRNA gene	Chr11:53556928-53557035 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037800	snRNA gene	Chr11:55588059-55588166 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034812	snRNA gene	Chr11:49364938-49365045 (+)
CAST/EiJ	MGP_CASTEiJ_G0036147	snRNA gene	Chr11:53605661-53605769 (+)
CBA/J	MGP_CBAJ_G0036941	snRNA gene	Chr11:58218901-58219008 (+)
DBA/2J	MGP_DBA2J_G0037118	snRNA gene	Chr11:51632045-51632152 (+)
FVB/NJ	MGP_FVBNJ_G0037066	snRNA gene	Chr11:51279500-51279607 (+)
LP/J	MGP_LPJ_G0037167	snRNA gene	Chr11:54387680-54387787 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037077	snRNA gene	Chr11:59428247-59428354 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037917	snRNA gene	Chr11:53632235-53632343 (+)
PWK/PhJ	MGP_PWKPhJ_G0035845	snRNA gene	Chr11:52171565-52171673 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035644	snRNA gene	Chr11:53412237-53412344 (+)
WSB/EiJ	MGP_WSBEiJ_G0036357	snRNA gene	Chr11:53270368-53270475 (+)

Homology

• Gene Tree
  Gm24198
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088437 (Evidence)
• NCBI Gene
  115487859

Representative Sequences			Length	Strain/Species
genomic	115487859	NCBI Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	XR_004937311	RefSeq | MGI Sequence Detail	106	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;