Gm24200 Gene Detail

Summary

• Symbol
  Gm24200
• Name
  predicted gene, 24200

• Feature Type
  snRNA gene
• IDs
  MGI:5453977
  NCBI Gene: 115487289
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:94166549-94166705 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453977	snRNA gene	Chr9:94166549-94166705 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038273	snRNA gene	Chr9:95400869-95401025 (+)
A/J	MGP_AJ_G0038266	snRNA gene	Chr9:92071102-92071258 (+)
AKR/J	MGP_AKRJ_G0038205	snRNA gene	Chr9:94257753-94257909 (+)
BALB/cJ	MGP_BALBcJ_G0038252	snRNA gene	Chr9:91746639-91746795 (+)
C3H/HeJ	MGP_C3HHeJ_G0037918	snRNA gene	Chr9:94717906-94718062 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038786	snRNA gene	Chr9:98103044-98103200 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035594	snRNA gene	Chr9:89949412-89949568 (+)
CAST/EiJ	MGP_CASTEiJ_G0037069	snRNA gene	Chr9:94443715-94443870 (+)
CBA/J	MGP_CBAJ_G0037890	snRNA gene	Chr9:101496736-101496892 (+)
DBA/2J	MGP_DBA2J_G0038079	snRNA gene	Chr9:91575071-91575227 (+)
FVB/NJ	MGP_FVBNJ_G0038027	snRNA gene	Chr9:90483975-90484131 (+)
LP/J	MGP_LPJ_G0038119	snRNA gene	Chr9:95629665-95629821 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038027	snRNA gene	Chr9:103547951-103548107 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038894	snRNA gene	Chr9:94481833-94481989 (+)
PWK/PhJ	MGP_PWKPhJ_G0036759	snRNA gene	Chr9:91734991-91735147 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036522	snRNA gene	Chr9:94474766-94474922 (+)
WSB/EiJ	MGP_WSBEiJ_G0037294	snRNA gene	Chr9:94374357-94374513 (+)

Homology

• Gene Tree
  Gm24200
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000064889 (Evidence)
• NCBI Gene
  115487289

Representative Sequences			Length	Strain/Species
genomic	115487289	NCBI Gene Model | MGI Sequence Detail	157	C57BL/6J
transcript	XR_004935925	RefSeq | MGI Sequence Detail	157	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;