Gm24204 Gene Detail

Summary

• Symbol
  Gm24204
• Name
  predicted gene, 24204

• Feature Type
  snRNA gene
• IDs
  MGI:5453981
  NCBI Gene: 115488592
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:79972648-79972754 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453981	snRNA gene	Chr15:79972648-79972754 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037538	snRNA gene	Chr15:80396431-80396537 (-)
A/J	MGP_AJ_G0037534	snRNA gene	Chr15:77620365-77620471 (-)
AKR/J	MGP_AKRJ_G0037472	snRNA gene	Chr15:79788333-79788439 (-)
BALB/cJ	MGP_BALBcJ_G0037520	snRNA gene	Chr15:77627498-77627604 (-)
C3H/HeJ	MGP_C3HHeJ_G0037197	snRNA gene	Chr15:79776599-79776705 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038038	snRNA gene	Chr15:83561498-83561604 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0036368	snRNA gene	Chr15:80493836-80493942 (-)
CBA/J	MGP_CBAJ_G0037169	snRNA gene	Chr15:86204930-86205036 (-)
DBA/2J	MGP_DBA2J_G0037348	snRNA gene	Chr15:77112540-77112646 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0037397	snRNA gene	Chr15:80584105-80584211 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037306	snRNA gene	Chr15:91243345-91243451 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038153	snRNA gene	Chr15:79816812-79816918 (-)
PWK/PhJ	MGP_PWKPhJ_G0036060	snRNA gene	Chr15:77120343-77120565 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035850	snRNA gene	Chr15:79624284-79624390 (-)
WSB/EiJ	MGP_WSBEiJ_G0036578	snRNA gene	Chr15:80219113-80219219 (-)

Homology

• Gene Tree
  Gm24204
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  15 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm24204
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000064884 (Evidence)
• NCBI Gene
  115488592

Representative Sequences			Length	Strain/Species
genomic	115488592	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004939125	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 18

  Phenotypes 15
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27

TSS for Gm24204:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr135417	Chr15:79973098-79973104 (-)	-347 bp