Gm24577 Gene Detail

Summary

• Symbol
  Gm24577
• Name
  predicted gene, 24577

• Feature Type
  snRNA gene
• IDs
  MGI:5454354
  NCBI Gene: 115489205
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:100049427-100049489 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  44 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454354	snRNA gene	ChrX:100049427-100049489 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038328	snRNA gene	ChrX:97483948-97484010 (+)
A/J	MGP_AJ_G0038323	snRNA gene	ChrX:97505068-97505130 (+)
AKR/J	MGP_AKRJ_G0038260	snRNA gene	ChrX:100296246-100296308 (+)
BALB/cJ	MGP_BALBcJ_G0038307	snRNA gene	ChrX:96245637-96245699 (+)
C3H/HeJ	MGP_C3HHeJ_G0037973	snRNA gene	ChrX:97899829-97899891 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038844	snRNA gene	ChrX:100397141-100397203 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0037942	snRNA gene	ChrX:103504606-103504668 (+)
DBA/2J	MGP_DBA2J_G0038134	snRNA gene	ChrX:96711845-96711907 (+)
FVB/NJ	MGP_FVBNJ_G0038081	snRNA gene	ChrX:96103743-96103805 (+)
LP/J	MGP_LPJ_G0038173	snRNA gene	ChrX:98452829-98452891 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038081	snRNA gene	ChrX:108061986-108062048 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm24577
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000089205 (Evidence)
• NCBI Gene
  115489205

Representative Sequences			Length	Strain/Species
genomic	115489205	NCBI Gene Model | MGI Sequence Detail	63	C57BL/6J
transcript	XR_004940508	RefSeq | MGI Sequence Detail	63	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;