Gm24848 Gene Detail

Summary

• Symbol
  Gm24848
• Name
  predicted gene, 24848

• Feature Type
  snRNA gene
• IDs
  MGI:5454625
  NCBI Gene: 115488987
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:63717807-63717913 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  202 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454625	snRNA gene	Chr18:63717807-63717913 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037679	snRNA gene	Chr18:63591964-63592070 (+)
A/J	MGP_AJ_G0037670	snRNA gene	Chr18:60860729-60860833 (+)
AKR/J	MGP_AKRJ_G0037608	snRNA gene	Chr18:62560775-62560887 (+)
BALB/cJ	MGP_BALBcJ_G0037654	snRNA gene	Chr18:60998460-60998564 (+)
C3H/HeJ	MGP_C3HHeJ_G0037326	snRNA gene	Chr18:62779479-62779571 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038179	snRNA gene	Chr18:65316132-65316238 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035100	snRNA gene	Chr18:60324367-60324473 (+)
CAST/EiJ	MGP_CASTEiJ_G0036492	snRNA gene	Chr18:62661631-62661745 (+)
CBA/J	MGP_CBAJ_G0037300	snRNA gene	Chr18:67416124-67416216 (+)
DBA/2J	MGP_DBA2J_G0037481	snRNA gene	Chr18:60520369-60520475 (+)
FVB/NJ	MGP_FVBNJ_G0037427	snRNA gene	Chr18:59908072-59908176 (+)
LP/J	MGP_LPJ_G0037533	snRNA gene	Chr18:63454675-63454779 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037441	snRNA gene	Chr18:68929305-68929417 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038289	snRNA gene	Chr18:62758631-62758735 (+)
PWK/PhJ	MGP_PWKPhJ_G0036188	snRNA gene	Chr18:60742794-60742904 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035974	snRNA gene	Chr18:62934030-62934143 (+)
WSB/EiJ	MGP_WSBEiJ_G0036708	snRNA gene	Chr18:62612431-62612537 (+)

Homology

• Gene Tree
  Gm24848
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088656 (Evidence)
• NCBI Gene
  115488987

Representative Sequences			Length	Strain/Species
genomic	115488987	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004940093	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;