Gm24869 Gene Detail

Summary

• Symbol
  Gm24869
• Name
  predicted gene, 24869

• Feature Type
  snoRNA gene
• IDs
  MGI:5454646
  NCBI Gene: 115486272
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:102594009-102594136 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454646	snoRNA gene	Chr4:102594009-102594136 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039207	snoRNA gene	Chr4:103136816-103136943 (+)
A/J	MGP_AJ_G0039203	snoRNA gene	Chr4:99539334-99539461 (+)
AKR/J	MGP_AKRJ_G0039133	snoRNA gene	Chr4:101949538-101949665 (+)
BALB/cJ	MGP_BALBcJ_G0039186	snoRNA gene	Chr4:99735459-99735586 (+)
C3H/HeJ	MGP_C3HHeJ_G0038847	snoRNA gene	Chr4:102737918-102738045 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039734	snoRNA gene	Chr4:107023899-107024026 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036432	snoRNA gene	Chr4:94900427-94900554 (+)
CAST/EiJ	MGP_CASTEiJ_G0037980	snoRNA gene	Chr4:100490923-100491050 (+)
CBA/J	MGP_CBAJ_G0038818	snoRNA gene	Chr4:110411621-110411748 (+)
DBA/2J	MGP_DBA2J_G0039003	snoRNA gene	Chr4:99196095-99196222 (+)
FVB/NJ	MGP_FVBNJ_G0038958	snoRNA gene	Chr4:98046376-98046503 (+)
LP/J	MGP_LPJ_G0039047	snoRNA gene	Chr4:103447284-103447411 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038959	snoRNA gene	Chr4:115883461-115883588 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039833	snoRNA gene	Chr4:102156343-102156470 (+)
PWK/PhJ	MGP_PWKPhJ_G0037667	snoRNA gene	Chr4:97403186-97403313 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037415	snoRNA gene	Chr4:99589674-99589801 (+)
WSB/EiJ	MGP_WSBEiJ_G0038209	snoRNA gene	Chr4:102341508-102341635 (+)

Homology

• Gene Tree
  Gm24869
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm24869
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077260 (Evidence)
• NCBI Gene
  115486272

Representative Sequences			Length	Strain/Species
genomic	115486272	NCBI Gene Model | MGI Sequence Detail	128	C57BL/6J
transcript	XR_004942376	RefSeq | MGI Sequence Detail	128	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12