Gm24887 Gene Detail

Summary

• Symbol
  Gm24887
• Name
  predicted gene, 24887

• Feature Type
  snRNA gene
• IDs
  MGI:5454664
  NCBI Gene: 115487854
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:79529847-79529954 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454664	snRNA gene	Chr11:79529847-79529954 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037329	snRNA gene	Chr11:80754674-80754781 (-)
A/J	MGP_AJ_G0037315	snRNA gene	Chr11:77646889-77646996 (-)
AKR/J	MGP_AKRJ_G0037261	snRNA gene	Chr11:79979240-79979347 (-)
BALB/cJ	MGP_BALBcJ_G0037306	snRNA gene	Chr11:78053569-78053676 (-)
C3H/HeJ	MGP_C3HHeJ_G0036989	snRNA gene	Chr11:80033795-80033902 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037820	snRNA gene	Chr11:83232426-83232533 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034828	snRNA gene	Chr11:74593245-74593352 (-)
CAST/EiJ	MGP_CASTEiJ_G0036167	snRNA gene	Chr11:80504077-80504184 (-)
CBA/J	MGP_CBAJ_G0036961	snRNA gene	Chr11:86852821-86852928 (-)
DBA/2J	MGP_DBA2J_G0037138	snRNA gene	Chr11:77197832-77197939 (-)
FVB/NJ	MGP_FVBNJ_G0037087	snRNA gene	Chr11:76794799-76794906 (-)
LP/J	MGP_LPJ_G0037187	snRNA gene	Chr11:81267672-81267779 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037097	snRNA gene	Chr11:87147566-87147673 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037938	snRNA gene	Chr11:80234980-80235087 (-)
PWK/PhJ	MGP_PWKPhJ_G0035864	snRNA gene	Chr11:78015244-78015351 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035663	snRNA gene	Chr11:79843560-79843667 (-)
WSB/EiJ	MGP_WSBEiJ_G0036378	snRNA gene	Chr11:80062907-80063014 (-)

Homology

• Gene Tree
  Gm24887
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm24887
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077574 (Evidence)
• NCBI Gene
  115487854

Representative Sequences			Length	Strain/Species
genomic	115487854	NCBI Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	XR_004937307	RefSeq | MGI Sequence Detail	108	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52