Gm24895 Gene Detail

Summary

• Symbol
  Gm24895
• Name
  predicted gene, 24895

• Feature Type
  snoRNA gene
• IDs
  MGI:5454672
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr12:109612563-109612636 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  46 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454672	snoRNA gene	Chr12:109612563-109612636 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0038656	snoRNA gene	Chr12:107568882-107568955 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0038642	snoRNA gene	Chr12:108042391-108042464 (+)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0039187	snoRNA gene	Chr12:115295512-115295585 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0038418	snoRNA gene	Chr12:105916861-105916934 (+)
LP/J	MGP_LPJ_G0038504	snoRNA gene	Chr12:111708337-111708410 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038416	snoRNA gene	Chr12:122992289-122992362 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039289	snoRNA gene	Chr12:110189984-110191040 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm24895
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  10

• Ensembl
  ENSMUSG00000084691 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084691	Ensembl Gene Model | MGI Sequence Detail	74	C57BL/6J
transcript	ENSMUST00000122742	Ensembl | MGI Sequence Detail	74	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm24895:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr115161	Chr12:109612355-109612369 (+)	-201 bp
Tssr115162	Chr12:109612549-109612568 (+)	-4 bp