Gm24989 Gene Detail

Summary

• Symbol
  Gm24989
• Name
  predicted gene, 24989

• Feature Type
  snoRNA gene
• IDs
  MGI:5454766
  NCBI Gene: 115487904
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:77135754-77135841 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  54 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454766	snoRNA gene	Chr11:77135754-77135841 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038586	snoRNA gene	Chr11:78128600-78128687 (-)
A/J	MGP_AJ_G0038577	snoRNA gene	Chr11:75188427-75188514 (-)
AKR/J	MGP_AKRJ_G0038513	snoRNA gene	Chr11:77473621-77473708 (-)
BALB/cJ	MGP_BALBcJ_G0038563	snoRNA gene	Chr11:75575050-75575137 (-)
C3H/HeJ	MGP_C3HHeJ_G0038225	snoRNA gene	Chr11:77498655-77498742 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039102	snoRNA gene	Chr11:80593493-80593580 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035876	snoRNA gene	Chr11:72172330-72172417 (-)
CAST/EiJ	MGP_CASTEiJ_G0037371	snoRNA gene	Chr11:77897972-77898059 (-)
CBA/J	MGP_CBAJ_G0038197	snoRNA gene	Chr11:84096503-84096590 (-)
DBA/2J	MGP_DBA2J_G0038387	snoRNA gene	Chr11:74777417-74777504 (-)
FVB/NJ	MGP_FVBNJ_G0038338	snoRNA gene	Chr11:74346978-74347065 (-)
LP/J	MGP_LPJ_G0038426	snoRNA gene	Chr11:78724122-78724209 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038338	snoRNA gene	Chr11:84556070-84556157 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039210	snoRNA gene	Chr11:77685826-77685913 (-)
PWK/PhJ	MGP_PWKPhJ_G0037056	snoRNA gene	Chr11:75529515-75529602 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036811	snoRNA gene	Chr11:77282827-77282914 (-)
WSB/EiJ	MGP_WSBEiJ_G0037600	snoRNA gene	Chr11:77493457-77493544 (-)

Homology

• Gene Tree
  Gm24989
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm24989
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077649 (Evidence)
• NCBI Gene
  115487904

Representative Sequences			Length	Strain/Species
genomic	115487904	NCBI Gene Model | MGI Sequence Detail	88	C57BL/6J
transcript	XR_004937366	RefSeq | MGI Sequence Detail	88	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52