Gm25261 Gene Detail

Summary

• Symbol
  Gm25261
• Name
  predicted gene, 25261

• Feature Type
  snoRNA gene
• IDs
  MGI:5455038
  NCBI Gene: 115486271
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:130966588-130966721 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455038	snoRNA gene	Chr4:130966588-130966721 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039228	snoRNA gene	Chr4:133303024-133303157 (+)
A/J	MGP_AJ_G0039224	snoRNA gene	Chr4:127776288-127776421 (+)
AKR/J	MGP_AKRJ_G0039154	snoRNA gene	Chr4:131369885-131370018 (+)
BALB/cJ	MGP_BALBcJ_G0039207	snoRNA gene	Chr4:128389418-128389551 (+)
C3H/HeJ	MGP_C3HHeJ_G0038868	snoRNA gene	Chr4:131598667-131598800 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039755	snoRNA gene	Chr4:138099261-138099394 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036452	snoRNA gene	Chr4:120866886-120867032 (+)
CAST/EiJ	MGP_CASTEiJ_G0038001	snoRNA gene	Chr4:129651498-129651631 (+)
CBA/J	MGP_CBAJ_G0038839	snoRNA gene	Chr4:141626636-141626769 (+)
DBA/2J	MGP_DBA2J_G0039024	snoRNA gene	Chr4:128204157-128204290 (+)
FVB/NJ	MGP_FVBNJ_G0038979	snoRNA gene	Chr4:127044134-127044267 (+)
LP/J	MGP_LPJ_G0039068	snoRNA gene	Chr4:133463268-133463401 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038980	snoRNA gene	Chr4:146319080-146319213 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039854	snoRNA gene	Chr4:131739265-131739398 (+)
PWK/PhJ	MGP_PWKPhJ_G0037687	snoRNA gene	Chr4:124854136-124854269 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037435	snoRNA gene	Chr4:127602669-127602802 (+)
WSB/EiJ	MGP_WSBEiJ_G0038230	snoRNA gene	Chr4:131904558-131904691 (+)

Homology

• Gene Tree
  Gm25261
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm25261
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088041 (Evidence)
• NCBI Gene
  115486271

Representative Sequences			Length	Strain/Species
genomic	115486271	NCBI Gene Model | MGI Sequence Detail	134	C57BL/6J
transcript	XR_004942375	RefSeq | MGI Sequence Detail	134	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8